Clone Read LE_HBa0001N08_SP6_127692

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001N08_SP6_127692
Primer
SP6
ID from Seq. Facility
Le-HBa001_N08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
587 trimmed for vector and quality, 1344 raw
Genbank Accession
Sequence
>LE_HBa0001N08_SP6_127692 (raw untrimmed)
CCCAATGTGGAAAATGGGTGGGGGATTTTTTTCCCTTGAAGATGTTTGAAAGAAAATGGTATAAAAAATGGAACAAATTTTTAGAATGATGATGATTTCA
CCTGTGAAAGCTAATATATCACTGGAGAAGTCATCGAAATCATCCGCATAATTTGGAGCATTTTTGTTTCTTCGAGAGAGATTTTCTCCAATAAATTTTT
TTCAATAAATGATAAAATAAAAAACAATTTTACATTTGTATTGGATAAGTAGGGACCAAAGTATAGTATCAAAAACTTTAGACTAGGGCGATGTATGTTT
TGGAAGAATATTGAGTGATGTCATATATGGTGTCTAAAGTAACAATTTTTTGAGACTTTTTGTCTAAATGTTAAATTAATTTTGAAGAGTGGCTATTTGC
CAACTCTCCCCTCTAACTCCTCAACATAATGTTTTTTTATTCCTTGAGAAGTGATCACTTTCCCTGTTCCTAATTTTTCTAGCCATCTTCTTTTTGTCTG
CATCATTATTAACATTATCGCTCAAGGAGAATAGAGTAAATAATTGGTATTTTCTTATATTGCATTGACACCCTCTAATGTAAGTTTTTTTTCATTAACA
CCACCCTTTACTGAATTATTTTCTAAAATTTGGGAGAAAAATGGTACTGGTTTGTTTGCAACTAGAGCTTTCCCCGAGAACAATATTCCCAAGGTCGATT
TTGATTGTTTGCGGAAGCCTCGTCAAAAACCCCCCAATCAGTGGACCTCTAGGTTTACCAAAAATATTTGGGGTTCATTTGACTCGATTCCGAAATCGGC
CCCCGACCCGAGAATAGTCGGGCAAAAATGAAACACATCAAAATTAGAAGTGTTTGAAAAAACATCATTGCAAGGATCTTTTCCTAAATGTATTCAACAT
TTGGTGAAATTAAATTTTTGAAATTCCTATAGGGAGATCTGACCCATTCTTTCTGAATTGTGGCGGGACGTGGTATAGGGGAGAAAAAAAAAACTGTCCA
GAGGGGAGACTTTCGCGACTCTTCAACCTCCCCAGGGAGAATTCCCCTCTTTCAGGGTGTCGGCTGGAGGCTGCCACATGGTAAGATTTGTGGAAAGAAG
GAAGTGCACAATTTAGTAATGAAGAATGGCCAAGGACAGAAGACTAAACCCATGGATGTCACCGTGACCATCAGAGACATAATCAGTAGTGATCGAGCGT
AAAGAAATATCAATTTCTTGATCGAGGTTTATCAATACTATATCTAATATTTCATAAAAAGGAGTGTAAATGTATAGGGTATTGTATGAGTCGTTCTTCT
CCTTCATTCTTACTTTTTATACGAGCTTTCTGGTTGTTTCTACC
>LE_HBa0001N08_SP6_127692 (trimmed for quality and cloning vector)
TTTTCCCTTGAAGATGTTTGAAAGAAAATGGTATAAAAAATGGAACAAATTTTTAGAATGATGATGATTTCACCTGTGAAAGCTAATATATCACTGGAGA
AGTCATCGAAATCATCCGCATAATTTGGAGCATTTTTGTTTCTTCGAGAGAGATTTTCTCCAATAAATTTTTTTCAATAAATGATAAAATAAAAAACAAT
TTTACATTTGTATTGGATAAGTAGGGACCAAAGTATAGTATCAAAAACTTTAGACTAGGGCGATGTATGTTTTGGAAGAATATTGAGTGATGTCATATAT
GGTGTCTAAAGTAACAATTTTTTGAGACTTTTTGTCTAAATGTTAAATTAATTTTGAAGAGTGGCTATTTGCCAACTCTCCCCTCTAACTCCTCAACATA
ATGTTTTTTTATTCCTTGAGAAGTGATCACTTTCCCTGTTCCTAATTTTTCTAGCCATCTTCTTTTTGTCTGCATCATTATTAACATTATCGCTCAAGGA
GAATAGAGTAAATAATTGGTATTTTCTTATATTGCATTGACACCCTCTAATGTAAGTTTTTTTTCATTAACACCACCCTTTACTGAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.918828
Expected error %
0.3533
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001N08
Clone
Clone name
hba-1n8
LE_HBa0001N08
P001N08
Clone type
BAC
Contamination
none
Estimated length
117,014
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found