Clone Read LE_HBa0001K22_SP6_127846

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0001K22_SP6_127846
Primer
SP6
ID from Seq. Facility
Le-HBa001_K22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 1333 raw
Genbank Accession
Sequence
>LE_HBa0001K22_SP6_127846 (raw untrimmed)
GCCATTTGTGGTTATCACTCCCGTCTTCCCTGGACAAAATTCCAAATATAAATAAAGTGCTAAAGTATAATTTATATACTCCCCTTTTTGGTAAAGAATG
GTCTAATTTGACTTGATACAATCCCTTCTGGGTTTTATAAAGAATAATTTAATTTGACTTGATACGAAGTCAAATATACAACCCTTACATTTGTTGTCTA
AAAAAAGAATTTTTTTTTAACACAGACTGTAAAAAAAAAATCATTCTTTTTTGAACGAACAGAATAATATACATCCCAAAACTTTATTATTGAGAAAGCA
TATAAAATTTGATATGGCAATTGCATGAATATGGAGTAAAATTATTCTAACACACAGAAATGATGCCATGCAGAAATGGTGTGGAAACTATATATAGCAC
AATTCCCAATGAAATTTAATGTACTCTCTCATAACTATATAGTATAGGCTTTCCTCTAACTATACATAAAGTTACCCCTAAAATATAGGCTAGCTACCCT
TCTAGCTTTGCCCCAAATTCTAAATTAGAACAAAAAAATATTTCTACATCTTTTTACAGTATTTAGTCCCTTTCACTCTTTGGGGTTATTTGGTATATCA
ATTGGAGGTAAATTATGTATAGTAGTTTAGAATTTTATATGTATAAATTATAAAAACTTATATTTGTGGCATCTTTTGGAGGTAAATTATTAATAGTAAT
TTAGAATTTTATATGTATAAAGTTAAAAAACTTATATCTGTTCATGTAAAGGTAGAAGATATAATAAATTAAATTTTATGTAATAATTATTTGTATAACT
TTTAATCAACCATTTCTTAATTGTTTAGTAACTTAAAAGTTTATCAAGTGTTTCTAACCTAAAAATGAGTTATATTTTTACCCTGAATCTAATTATTTTA
AAGTTAAGTAGGTATACTTTTAGTAAACCCTTTGTACCAAGGGTTTTACTTACCCAAACATCCTATTTCCTTAAAAATAATTTTTGAAAATTACAAACCC
TTTTGTAAAAACGTTATCTTTTAAATTATTAAAAAAAAAATTTTTTTATCTGCATCGGGGCCCAAGCCTTCTAGATTAAATCTCATTTCGCCATTAAAAT
TTGACCGGCGCAATATCCTTGTTTTAGATTTTCCCCTTGTTATCTTAAATCTAAATACCCACCTGAAATTCTTATCAAAATCTTCCCTGTTTGTCGTGGA
AAAAACAGAGTTATATCTGATAATTTCTCATGCTTTGAACATTAATCTGTACTGGGTGAGAAACGGCGCAGCAAGATGAAAGTTTTCACTGTTATAGTGG
GGGGCCTCCTGTCCGTCAGCACTCTGGCGCCCC
>LE_HBa0001K22_SP6_127846 (trimmed for quality and cloning vector)
AAAATTCCAAATATAAATAAAGTGCTAAAGTATAATTTATATACTCCCCTTTTTGGTAAAGAATGGTCTAATTTGACTTGATACAATCCCTTCTGGGTTT
TATAAAGAATAATTTAATTTGACTTGATACGAAGTCAAATATACAACCCTTACATTTGTTGTCTAAAAAAAGAATTTTTTTTTAACACAGACTGTAAAAA
AAAAATCATTCTTTTTTGAACGAACAGAATAATATACATCCCAAAACTTTATTATTGAGAAAGCATATAAAATTTGATATGGCAATTGCATGAATATGGA
GTAAAATTATTCTAACACACAGAAATGATGCCATGCAGAAATGGTGTGGAAACTATATATAGCACAATTCCCAATGAAATTTAATGTACTCTCTCATAAC
TATATAGTATAGGCTTTCCTCTAACTATACATAAAGTTACCCCTAAAATATAGGCTAGCTACCCTTCTAGCTTTGCCCCAAATTCTAAATTAGAACAAAA
AAATATTTCTACATCTTTTTACAGTATTTAGTCCCTTTCACTCTTTGGGGTTATTTGGTATATCAATTGGAGGTAAATTATGTATAGTAGTTTAGAATTT
TATATGTATAAATTATAAAAACTTATATTTGTGGCATCTTTTGGAGGTAAATTAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.904217
Expected error %
0.5353
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0001K22
Clone
Clone name
hba-1k22
LE_HBa0001K22
C08HBa0001K22
P001K22
Clone type
BAC
Contamination
none
Estimated length
119,470
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
3 sequencing reads found