Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0017I24_SP6_130595

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0017I24_SP6_130595
Primer
SP6
ID from Seq. Facility
LE_HBa_017_I24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
657 trimmed for vector and quality, 892 raw
Genbank Accession
DU049799
Sequence
>LE_HBa0017I24_SP6_130595 (raw untrimmed)
AGGGTGGAAAAACGAATGGGAACCACCTGCGACTGTCGCTCAGAAGATAAAGGTAATCCTATCTCTCCTATTTATAACTTGTAAAGGTGTCTGCTAGGTG
TGGAATGACTCTATTACAGTACTATTAGGAATAATACATAAATAGACACTCAACCTGGCCTTAAATGGCAAGTGAAAAACTCCAACTTCGAGAGTGTACA
TCTAAACACCTCAACTCAAACTTGATTCCACTATGTCAGTTAAACAATCAACTTACAAAATGATAATCTACATGTGCATCTCCAAAATTTATGTGTCACG
TCAGTGTCAGGTGTCCATGAGACGTCGTGGGAAAGAGTTGGAATGTTAACTTGTTAGTTTGGACTTGTGACTGAGTTAAGGTCTCTAAACGTGGCAGAGG
TCAAGTTTGAGTGTCTGTTTATAAAATATTATTATTAAGGCACTAAACTTATTGTTCTTTTAGGAGGAAATAAATATGCACATAAAGTTTTTGACTGCTG
CCATTACTCTGCCTGAGCTGAAGAAGCCTGACGCTGGCGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTGCAACAGCTCCATTCATTTTT
GGATACGAGGTATGATGCTTTCGTACCATACTTTTTATTAGTTAATGATATTCTCAAAATGCCCCAACACTTGCGGGCCTGATTCTTTTTTTATGGGTCA
AGCACGTGGAAATTCTTTTTAGTTTGCTTGGCACGGTGATTCGATCTCAAGATCTCTGCATACTCTGATACCATGTTGGAGTGTGTGACCATCTCATCTA
AAATCCTAACCTAATAGAGAGAGCACACTTTTTATTATTTAATGAAATTTTCACAGTACACTCCCAAAATGGTTTAGGCCGTTCAAAATATA
>LE_HBa0017I24_SP6_130595 (trimmed for quality and cloning vector)
AAAGGTAATCCTATCTCTCCTATTTATAACTTGTAAAGGTGTCTGCTAGGTGTGGAATGACTCTATTACAGTACTATTAGGAATAATACATAAATAGACA
CTCAACCTGGCCTTAAATGGCAAGTGAAAAACTCCAACTTCGAGAGTGTACATCTAAACACCTCAACTCAAACTTGATTCCACTATGTCAGTTAAACAAT
CAACTTACAAAATGATAATCTACATGTGCATCTCCAAAATTTATGTGTCACGTCAGTGTCAGGTGTCCATGAGACGTCGTGGGAAAGAGTTGGAATGTTA
ACTTGTTAGTTTGGACTTGTGACTGAGTTAAGGTCTCTAAACGTGGCAGAGGTCAAGTTTGAGTGTCTGTTTATAAAATATTATTATTAAGGCACTAAAC
TTATTGTTCTTTTAGGAGGAAATAAATATGCACATAAAGTTTTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACGCTGGCGAGGACATGG
CTGAGGAAGTGCAAAGTATGCTTCAGGAGCTGCAACAGCTCCATTCATTTTTGGATACGAGGTATGATGCTTTCGTACCATACTTTTTATTAGTTAATGA
TATTCTCAAAATGCCCCAACACTTGCGGGCCTGATTCTTTTTTTATGGGTCAAGCAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.965784
Expected error %
0.4874
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0017I24
Clone
Clone name
hba-17i24
LE_HBa0017I24
C12HBa0017I24
P017I24
Clone type
BAC
Contamination
none
Estimated length
100,672
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found