Clone Read LE_HBa0018N23_T7_131602

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0018N23_T7_131602
Primer
T7
ID from Seq. Facility
LE_HBa_018_N23-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
139 trimmed for vector and quality, 925 raw
Sequence
>LE_HBa0018N23_T7_131602 (raw untrimmed)
CTAGAGATATGGGTTAGGGTGGGAACCTCTAAAGTCTACTTGTTGGCATGTAAGCTTTGTGCTTCGAGTCCTTTTCTTTTGGCTTGTCAAAGTCCTGGTT
GTCGTTGCCACTTTGTTACCATACGTTACGTACAGGGCATTTCAAACACAGTTCCATCCTATGTACCATGATCAGATTCAAAGGAAACAATTCGAAAGTT
TAAACAGTGACTTTTCTGAGGAGTCCAGTGACAGATGCAAACCAAAGATATATCTTTAATATTTAGTTTGTAGTTTATAATTGACTGTTTAATTTGTAAA
GTAAATCAAGTTGTGTAAAGTAGATATATAACAATACTGATCGAACAGGGCTAGGAAATTAGAAACTAATATTTTGAGGTGGAATTTATTATTATCGTTA
CATTCTAAATACATCCCTTTTCGGTAAAAGGATGTGTATTTACCAATCACGGATATATATAATTATTCTTCCCACCAAACCTTATTCCATATGATCTACC
TAATTTTGTCATTTCTAATAATTGGTAAAAATTTCTATAGAATTAATTCGAACTCGATCATTTTATTCTTTCTACTTTGAACGACGAGTGCAGTACCTCC
TGTTCTTTCATTACTCTAACTTCTTTCATCACGGTACTTAATGACATTCTCGAAACTCCACACGTTTCAAAACAGCCCCGCATGACCTCAAATTCAAAAA
AATTACACTATATTTTCACTCTTGCAACCCAGTCTGATACTTTACATGCTCGGTTCTCCTCCACTTTATCGACCTCTTTTCTCCAATCTTTTGACTATAT
TTTTTCTCAACATATTCCACCTCTCCCTCCCTTCTTTCTTAACATTTACACTCTCTTAATCTCTCAATTAGATTTATCATTATACATATCACAATTATCC
TACTTTTACAGTATCTCCCTGACAT
>LE_HBa0018N23_T7_131602 (trimmed for quality and cloning vector)
CCTGGTTGTCGTTGCCACTTTGTTACCATACGTTACGTACAGGGCATTTCAAACACAGTTCCATCCTATGTACCATGATCAGATTCAAAGGAAACAATTC
GAAAGTTTAAACAGTGACTTTTCTGAGGAGTCCAGTGAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.933933
Expected error %
0.4079
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0018N23
Clone
Clone name
hba-18n23
LE_HBa0018N23
C02HBa0018N23
P018N23
Clone type
BAC
Contamination
none
Estimated length
106,138
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found