Clone Read LE_HBa0020A13_SP6_132493

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020A13_SP6_132493
Primer
SP6
ID from Seq. Facility
LE_HBa_020_A13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
647 trimmed for vector and quality, 989 raw
Genbank Accession
Sequence
>LE_HBa0020A13_SP6_132493 (raw untrimmed)
GGGGGGGGTCGTAGGACAGGGGAAGAGTTAANAGGGGGTCTGGGCTGGAAACATAAATTCTAGAAAAGAAAAGTTCAAAGGAATTGAATGCATGATATAA
GCAACAGATTAACCCCTTTACGAGCATACTGGAATCCATCTGTATTAAGTGGTTAGCTATCTATAATTATGTATTATATCTTTGTATAGAGTAATTATTT
TCCATAAAACTGATTAGATTAACCCCCTTCGGTACAAGGTGGGTTCACCTTGATAGCTATATTATATGATATAACCCAAAATTATCATACCCGACATCAC
AATTGTTATAGCATCACTTTTTCATCAGAAAATAGAAGAACCCACAGGAGAAACAAATCCAAAAACTTTAAAACGCCAGTAGAGCATGTCCAAATGAACA
AAAAAGAAATACTTTTCGAAAATGTATGAAACATATTCAATATAACATCTACCGCCAACCTGAAGGGAAGCACCCTGTTTGCATGTATATCTAAACTATT
TGTGAAAAAATAAGCAATGAAGTGCATATAATTTGATGTATAACACCTATATATCTGTCAAACAAAATACAACATATAGTTTGTTAATTATAGGAGCTAG
GACAAATCAAATTTAAGAGACTTTACACTTTGAGCATTTCATGCCTCTAATGAAAACAAAGACAAGATTCANGTCCTGAGGCAATGCAATGAACAGAATG
GCGCCCAACCACACTTCAGGCGAGGTGCGGCACACAAGCGATCAATAAGTGCACACCTCAAGTTAGGAAAAAATCAAAAATTTAGAAATCAAAAGAAAAA
GAGATATCCTGCAAGAGTAAAAAAAATGTACTTCTGAGAAATCCATCAAAACCCCCACATCCGAAAAAAAATGAACTGAGAAAATTCCCAAATTTCAAAT
TGGAAAAACACAAAAAACAGGGCCTTATGATTAATCTTCTTTTTTTTTTTAAAAAAAATTATTATTTTGGAAAAATTTTACTGCCCTAT
>LE_HBa0020A13_SP6_132493 (trimmed for quality and cloning vector)
TGGAAACATAAATTCTAGAAAAGAAAAGTTCAAAGGAATTGAATGCATGATATAAGCAACAGATTAACCCCTTTACGAGCATACTGGAATCCATCTGTAT
TAAGTGGTTAGCTATCTATAATTATGTATTATATCTTTGTATAGAGTAATTATTTTCCATAAAACTGATTAGATTAACCCCCTTCGGTACAAGGTGGGTT
CACCTTGATAGCTATATTATATGATATAACCCAAAATTATCATACCCGACATCACAATTGTTATAGCATCACTTTTTCATCAGAAAATAGAAGAACCCAC
AGGAGAAACAAATCCAAAAACTTTAAAACGCCAGTAGAGCATGTCCAAATGAACAAAAAAGAAATACTTTTCGAAAATGTATGAAACATATTCAATATAA
CATCTACCGCCAACCTGAAGGGAAGCACCCTGTTTGCATGTATATCTAAACTATTTGTGAAAAAATAAGCAATGAAGTGCATATAATTTGATGTATAACA
CCTATATATCTGTCAAACAAAATACAACATATAGTTTGTTAATTATAGGAGCTAGGACAAATCAAATTTAAGAGACTTTACACTTTGAGCATTTCATGCC
TCTAATGAAAACAAAGACAAGATTCANGTCCTGAGGCAATGCAATGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937877
Expected error %
0.3353
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020A13
Clone
Clone name
hba-20a13
LE_HBa0020A13
P020A13
Clone type
BAC
Contamination
none
Estimated length
111,068
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found