Clone Read LE_HBa0020D06_SP6_132623

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020D06_SP6_132623
Primer
SP6
ID from Seq. Facility
LE_HBa_020_D06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
637 trimmed for vector and quality, 974 raw
Genbank Accession
Sequence
>LE_HBa0020D06_SP6_132623 (raw untrimmed)
TTTTTGTAAGTTTCTTAGCGAAAGTTAATGATGATATTTTGAGAAAAGAGTTTCTAAAACATCATTTGTAGGACAATCGAGTATGACATCAATATTTAAG
AAGTCTGGTATCTAGATATACCATTAATGTTTAGGCAGTATGACTTCTCGGGTCATTAATCATCATATTAAAATATGATTTTGATATGTTTTAAAGAAAG
AGTTTTCAAGTATGAATTGAGTAAGAGTATCAGGGGACTATGTATTCCCAGAGGTATTAATTTTTACATTGAAAAAAAAAGAAAATGATATTTTTAAATG
AGTTATGAGTTTAAAAGATATTTCAAGAGCAGTTACCTCTTAAAAGAGGGTAGTTTGAGAAATTATCTCAAACCAGAGGAAGATTTATGTTTTTAACCAT
AATGAACATAACTATATATTGTCGGGATATTGAGTACCGATATGCGGATTCGTTTAGCCAACTCAAAGTCCTCATAAACCATGTTAGCCAACATGAGTAA
AGGGTCATACTTTTTAGATAATTTCTTATTACTTTTTCATCATAGCTTAGTGGATCCACTTAGTTGAGGTGTTCTATACCCCGACAAGGTATAGGAAAAT
TTGGCAACGTGCGCGAAATTATGAATAATCATGCAGCTCATAGTGATGGTTGTCGGTTAGAGAACTTCCCAATAGTGTCAAAAAGTAGTTACATATATCA
CTTCTTTAAGGAGTCGTGGGTCTTGTCCCGACACTCTTCTTCTTATAGTAAAGGCTTCATAGATATATATTTTTTGAAGAATTTCAGTCTCAGGAGTTTT
TCTTAAAAGTAATGTTTCATACTCAGTATATTCAAAAAAGTTTTTGAGATTCCGGAAATCCCTTTTTAAATGTTTCTTTCAAATTGGATGTTATGTATGC
TTGAATTTATCTTCCACTTAAAGTCCACCCATAAAAGGGTTTAAATGGGGGCCCAAAATGGTTCTAAAATTTTT
>LE_HBa0020D06_SP6_132623 (trimmed for quality and cloning vector)
TTTTGAGAAAAGAGTTTCTAAAACATCATTTGTAGGACAATCGAGTATGACATCAATATTTAAGAAGTCTGGTATCTAGATATACCATTAATGTTTAGGC
AGTATGACTTCTCGGGTCATTAATCATCATATTAAAATATGATTTTGATATGTTTTAAAGAAAGAGTTTTCAAGTATGAATTGAGTAAGAGTATCAGGGG
ACTATGTATTCCCAGAGGTATTAATTTTTACATTGAAAAAAAAAGAAAATGATATTTTTAAATGAGTTATGAGTTTAAAAGATATTTCAAGAGCAGTTAC
CTCTTAAAAGAGGGTAGTTTGAGAAATTATCTCAAACCAGAGGAAGATTTATGTTTTTAACCATAATGAACATAACTATATATTGTCGGGATATTGAGTA
CCGATATGCGGATTCGTTTAGCCAACTCAAAGTCCTCATAAACCATGTTAGCCAACATGAGTAAAGGGTCATACTTTTTAGATAATTTCTTATTACTTTT
TCATCATAGCTTAGTGGATCCACTTAGTTGAGGTGTTCTATACCCCGACAAGGTATAGGAAAATTTGGCAACGTGCGCGAAATTATGAATAATCATGCAG
CTCATAGTGATGGTTGTCGGTTAGAGAACTTCCCAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938549
Expected error %
0.4109
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020D06
Clone
Clone name
hba-20d6
LE_HBa0020D06
C10HBa0020D06
P020D06
Clone type
BAC
Contamination
none
Estimated length
139,477
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found