Clone Read LE_HBa0167M10_T7_13267

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0167M10_T7_13267
Primer
T7
ID from Seq. Facility
LE_HBa_167_M10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
655 trimmed for vector and quality, 832 raw
Genbank Accession
DU031889
Sequence
>LE_HBa0167M10_T7_13267 (raw untrimmed)
CTTGGGACCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTACCTCGCTTACCAAACCGCATCACACCTTTCATGGGTGAAACCTTCAGCAA
GACTTGTTCACCCTCCATAAAATCCAAGTCCCTAACCTTCATATTCTTTCTGCCTACTCTGAGCTAATAGAAGCTTCTCCTGAATGAATTTTACTTTATC
TAACGGTTCCCTCAAAAGATCGGTACCCCAAGGTCTCACCTCAAATGCATCAAACCAACCAATGGAGACCTAAATCTCCTCCCATACAGTGCCTCAAATG
GGGCCATATCAATACTCGAGTGATAGCTATTATTGCATGAAAACTCTACTAAGGGTAAGAATTTATCCCAATGACCACCAAATTCTATCACACATGCACG
AAGCATATCCTCCAACACCTGAATTGTTTGCTTAGACTGACCATCGGTCTGAGGGTGAAATGCAGTACTAAGATCCAACCTAGTACCTAATTCAGCATGT
AATGTTCTCCAAAACTTAGAAGTAAATTGCGTACCTCTATCTGATATGATGGAAAGTGGAACTCCATGCAATCGAAGAATTTTTGAGATATAGAGTTTGG
CTAACTTCTCTGCATTGTAAGTCATCTTGACCGGAATGAAGTGAGCAGACTTAGATAACCTGTCAACAATTACCCAAATAGAATCAAACTTACCCAATGT
CTTTGGAAGACCAAACACGAAATCCATTGTCATTCCTTTCCACCTCCATGCATGAATGAACTTTCTATGTAAGTGTCTCTCCGGGTCTCTGGTGTTCATA
CTTTACTTGCTTACAATTCGGGGAATGGGGAA
>LE_HBa0167M10_T7_13267 (trimmed for quality and cloning vector)
AGCTTACCTCGCTTACCAAACCGCATCACACCTTTCATGGGTGAAACCTTCAGCAAGACTTGTTCACCCTCCATAAAATCCAAGTCCCTAACCTTCATAT
TCTTTCTGCCTACTCTGAGCTAATAGAAGCTTCTCCTGAATGAATTTTACTTTATCTAACGGTTCCCTCAAAAGATCGGTACCCCAAGGTCTCACCTCAA
ATGCATCAAACCAACCAATGGAGACCTAAATCTCCTCCCATACAGTGCCTCAAATGGGGCCATATCAATACTCGAGTGATAGCTATTATTGCATGAAAAC
TCTACTAAGGGTAAGAATTTATCCCAATGACCACCAAATTCTATCACACATGCACGAAGCATATCCTCCAACACCTGAATTGTTTGCTTAGACTGACCAT
CGGTCTGAGGGTGAAATGCAGTACTAAGATCCAACCTAGTACCTAATTCAGCATGTAATGTTCTCCAAAACTTAGAAGTAAATTGCGTACCTCTATCTGA
TATGATGGAAAGTGGAACTCCATGCAATCGAAGAATTTTTGAGATATAGAGTTTGGCTAACTTCTCTGCATTGTAAGTCATCTTGACCGGAATGAAGTGA
GCAGACTTAGATAACCTGTCAACAATTACCCAAATAGAATCAAACTTACCCAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964638
Expected error %
0.192504
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT66771.1| Score 249 E Value 3e-65 Identity 20.70% Align. Length 638bp (97.40%) Frame 1
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAV31169.1| Score 246 E Value 3e-64 Identity 20.80% Align. Length 638bp (97.40%) Frame 1
putative polyprotein [Solanum tuberosum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0167M10
Clone
Clone name
hba-167m10
LE_HBa0167M10
P167M10
Clone type
BAC
Contamination
none
Estimated length
117,114
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found