Clone Read LE_HBa0020G17_SP6_132789

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020G17_SP6_132789
Primer
SP6
ID from Seq. Facility
LE_HBa_020_G17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
766 trimmed for vector and quality, 991 raw
Genbank Accession
Sequence
>LE_HBa0020G17_SP6_132789 (raw untrimmed)
CTTGCCTATGCCTTAGAATTAGGGTTAAGTTTTNNAGAATAACATTTTGGAGAAGAATGTCATATTATAACACTTACTCAAGTAAATAAAGATGAGATAT
CCCATACACCCTCATCCGAATTACCTAAGTAATCCTTAAGACTATCTAAGATAAGATTATGCCAATTTCACCAATTAACTTCCTTACCAAGAGTTACTCT
TAAGCTCCCCTAAGTAAGGCATGAAGAGACCATTCATATAACCTCTCCAAACCTTATCTAGACAATACTTAAAGCTACTATAGATAAGCACTTATTTTTT
AACATTCCTTTAACCTAAGTCACCATGTTCCATAAACCATTTAAGAGACATTTCACAATTAAGGACTTACACATAATGGTCTTGGATAAGACCTAGGTAA
CAGACATATTAACATCTTCAAAGCCCGTTTGTGCAATTTCTAGATAGTGTCCCATTCCACTACCTAAACTTCATAGTACTTATCCAACACTATCATATAT
GCCACATGATGAGAATAGGCAATAACTTACATAGACCATACTAGCTATGCATAAACTCAGGAGTCTACCCTCCTCCAATTGAGGGTGTTCTACTTGCCAA
TCGTACAACTAGGATACACCCCATGTATGCACATGGTTAAGGACTATCAAGGGTTTCTTTGTGTTTTAGTCTTATCTAGAGAACAATCACTCCCCAAGCA
TACTCACCCAGTGCTAGACTTTGATCTCATAGAGTGATTCAATAAAGGAAAATATGAATAGGTACCATATCTTGTTCATAACCAAATCATAATACACCTT
TGCAAAGAGGATCTACTAGGGCTGCCTACAATTATTAAGGATATAATGACTCTTCCAAGAATGATTTCATGTCATTTCAGACAATGATCCCTAAGTCCCC
CATCACATAGGAAAGAATCATTATGACTTTCACTTCAAGGAATCATACCCTTAATCTAGGTGAAGGTTCACATAAATGACCTTTATTTTTT
>LE_HBa0020G17_SP6_132789 (trimmed for quality and cloning vector)
AATAACATTTTGGAGAAGAATGTCATATTATAACACTTACTCAAGTAAATAAAGATGAGATATCCCATACACCCTCATCCGAATTACCTAAGTAATCCTT
AAGACTATCTAAGATAAGATTATGCCAATTTCACCAATTAACTTCCTTACCAAGAGTTACTCTTAAGCTCCCCTAAGTAAGGCATGAAGAGACCATTCAT
ATAACCTCTCCAAACCTTATCTAGACAATACTTAAAGCTACTATAGATAAGCACTTATTTTTTAACATTCCTTTAACCTAAGTCACCATGTTCCATAAAC
CATTTAAGAGACATTTCACAATTAAGGACTTACACATAATGGTCTTGGATAAGACCTAGGTAACAGACATATTAACATCTTCAAAGCCCGTTTGTGCAAT
TTCTAGATAGTGTCCCATTCCACTACCTAAACTTCATAGTACTTATCCAACACTATCATATATGCCACATGATGAGAATAGGCAATAACTTACATAGACC
ATACTAGCTATGCATAAACTCAGGAGTCTACCCTCCTCCAATTGAGGGTGTTCTACTTGCCAATCGTACAACTAGGATACACCCCATGTATGCACATGGT
TAAGGACTATCAAGGGTTTCTTTGTGTTTTAGTCTTATCTAGAGAACAATCACTCCCCAAGCATACTCACCCAGTGCTAGACTTTGATCTCATAGAGTGA
TTCAATAAAGGAAAATATGAATAGGTACCATATCTTGTTCATAACCAAATCATAATACACCTTTGC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941234
Expected error %
0.0451
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020G17
Clone
Clone name
hba-20g17
LE_HBa0020G17
P020G17
Clone type
BAC
Contamination
none
Estimated length
36,643
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found