Clone Read LE_HBa0020H14_T7_132832

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0020H14_T7_132832
Primer
T7
ID from Seq. Facility
LE_HBa_020_H14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
780 trimmed for vector and quality, 1014 raw
Genbank Accession
DU051773
Sequence
>LE_HBa0020H14_T7_132832 (raw untrimmed)
TTAAACCAGGTCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTATTTTATCTACCCTACGCCAATACTATATTTATCATCATTATCAAT
CTGTCCATTTCTTTCGATTATTGATTCCAGATACTTAAAACTTCCTTCTTTGGGTATGGATTGTTTCAATACTTACTTCCATCATGTAACATGAGTTGGG
CTACTGAACTTGCACTCCAAGTATTTTGTCTTAATCATGCTTAATCTGAACCCTTCATACTACAAGGTATGTCTCCAAACGTTCAATCTATTGTTAACTT
TATCATGTGTATCATCGATCAACACTATGTCATCTACAAAGAGAAAATACCATGACATCTCTTAGTAGATATGTCGTGTCTATACATCCATCACAAATGC
AAATAGAAATAGGCTAAGTAGGATAAATAATCCCCTTGAAGTTGTTCTGATGTGTCTATTGAAATCTCCTCTAATGAAAAGCTTCTCGGTACACGGGGTA
CCCCTCACAACCTCGTCCAAATCCTCCCAAAAATTCTTTGTATCCTCTAGTCCAAGCCTTCTTATGGTGCATATGCACTAATCATGTTCAAGATAAGTCC
TCTAAAATATCTTATTGAATAAGACAAATGACTGAATTAGCTAAAAACCAAGTTGGGAACTAAAGTAAAATTTGCAACCTTAATATAACTAAACTAGATA
AAAAGCCATTAAAATATCTTGATTCTCCAAGAAAAATGAAAGAATAATGATATAATGCTCCTGGTACTAATTGAATGGCTTACATTTTTGACAAGTGTTT
CACAAAGAACTCAACTAGAAAAAGAAAAGAGCCTTCAAAAATAAATTATGTAAGTGTTATCAAAAAATAAGATCCACAATTTTTGTTAACAAAGACACTT
AAATTTTTTTATTCTTTAGGGGCCAAACGGCTCGGGATTCCAATGTAAACTCCAAAAAAAATGAAACCCCTGAAAAAAAATCTGGGTACTCCAAAAAAAA
ATTTAACTTAAAAC
>LE_HBa0020H14_T7_132832 (trimmed for quality and cloning vector)
AGCTTCTATTTTATCTACCCTACGCCAATACTATATTTATCATCATTATCAATCTGTCCATTTCTTTCGATTATTGATTCCAGATACTTAAAACTTCCTT
CTTTGGGTATGGATTGTTTCAATACTTACTTCCATCATGTAACATGAGTTGGGCTACTGAACTTGCACTCCAAGTATTTTGTCTTAATCATGCTTAATCT
GAACCCTTCATACTACAAGGTATGTCTCCAAACGTTCAATCTATTGTTAACTTTATCATGTGTATCATCGATCAACACTATGTCATCTACAAAGAGAAAA
TACCATGACATCTCTTAGTAGATATGTCGTGTCTATACATCCATCACAAATGCAAATAGAAATAGGCTAAGTAGGATAAATAATCCCCTTGAAGTTGTTC
TGATGTGTCTATTGAAATCTCCTCTAATGAAAAGCTTCTCGGTACACGGGGTACCCCTCACAACCTCGTCCAAATCCTCCCAAAAATTCTTTGTATCCTC
TAGTCCAAGCCTTCTTATGGTGCATATGCACTAATCATGTTCAAGATAAGTCCTCTAAAATATCTTATTGAATAAGACAAATGACTGAATTAGCTAAAAA
CCAAGTTGGGAACTAAAGTAAAATTTGCAACCTTAATATAACTAAACTAGATAAAAAGCCATTAAAATATCTTGATTCTCCAAGAAAAATGAAAGAATAA
TGATATAATGCTCCTGGTACTAATTGAATGGCTTACATTTTTGACAAGTGTTTCACAAAGAACTCAACTAGAAAAAGAAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.944309
Expected error %
0.746
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT40504.1| Score 100 E Value 6e-20 Identity 16.80% Align. Length 338bp (43.33%) Frame 1
putative polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAM47598.1| Score 92 E Value 2e-17 Identity 15.40% Align. Length 311bp (39.87%) Frame 1
NBS/LRR resistance protein-like protein [Capsicum annuum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0020H14
Clone
Clone name
hba-20h14
LE_HBa0020H14
C03HBa0020H14
P020H14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found