Clone Read LE_HBa0023B20_SP6_134091

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023B20_SP6_134091
Primer
SP6
ID from Seq. Facility
LE_HBa_023_B20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
568 trimmed for vector and quality, 828 raw
Genbank Accession
DU044154
Sequence
>LE_HBa0023B20_SP6_134091 (raw untrimmed)
AAATCCCTGAAACGGGAAAGAAGTATACGATCAGAGCTTCGTTAAAGTTCCTTTTGTAACAAATTAATGTCCTATGTGAGTCTATATAACCCCTTCTAAA
TGAAATGATGTTTATGTGCAAGTTGTGTCGAAATGTATACACACTTGAATGAATGACTGAAGCTAAGTTAATTCCAAAGGTGAGTTTTGAGGTGAAGACT
CTTCATGATGTGACCTGATGTGTTTACTAGAAACCTCACCACATCCTTAGAGCTTTTTAAGGTAGGTCGGAGGATGAATGAACTTCATGAGTTGAGATGT
GGTGTTCTTGAGTTATCCTTAACCTATAGTGTATAATGTTGAGAATATGTGGGCATTCATGCCTAGCACCGATAGGATATGAAGGAGAGGTGGTTACACT
TTGTTAGTTGAGATGTTGTATTCCAACATACCCCTTGAGATAAGTACTCCACGTAATAGAGATTGAGTTACTTAGTAGTAATCTCAGTTGCCTTAGATAT
GCGCCCACATAGGTGTAGATAGTGGGAAAACCATGTAAAATCTAGAAGAAAAGACCTCACTCTAGGCAAGTGGGGGAACCTTTCTCTGATAAGGGAAGTA
TCGGGTTCCATGTCTACCTACTATGGTCTATGTCGTTTAAGATAGCCCCAAACCAAAAGTAATGAAAGTGATAAGTCTTTTTAAAAGAGTATCCTACTTA
GGGGAGCCTATTTAAATGAGAACGCCTATCTATCCTTTGCCACTAGGTAGGCTTTACAAAAAGGGGAATTCCTTGAAGAAGTCTTAAAAGAAATTAAAGA
TACAAAACTCTTCCAAAAAAGAGTGCAA
>LE_HBa0023B20_SP6_134091 (trimmed for quality and cloning vector)
ACAAATTAATGTCCTATGTGAGTCTATATAACCCCTTCTAAATGAAATGATGTTTATGTGCAAGTTGTGTCGAAATGTATACACACTTGAATGAATGACT
GAAGCTAAGTTAATTCCAAAGGTGAGTTTTGAGGTGAAGACTCTTCATGATGTGACCTGATGTGTTTACTAGAAACCTCACCACATCCTTAGAGCTTTTT
AAGGTAGGTCGGAGGATGAATGAACTTCATGAGTTGAGATGTGGTGTTCTTGAGTTATCCTTAACCTATAGTGTATAATGTTGAGAATATGTGGGCATTC
ATGCCTAGCACCGATAGGATATGAAGGAGAGGTGGTTACACTTTGTTAGTTGAGATGTTGTATTCCAACATACCCCTTGAGATAAGTACTCCACGTAATA
GAGATTGAGTTACTTAGTAGTAATCTCAGTTGCCTTAGATATGCGCCCACATAGGTGTAGATAGTGGGAAAACCATGTAAAATCTAGAAGAAAAGACCTC
ACTCTAGGCAAGTGGGGGAACCTTTCTCTGATAAGGGAAGTATCGGGTTCCATGTCTACCTACTATGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953878
Expected error %
0.7658
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023B20
Clone
Clone name
hba-23b20
LE_HBa0023B20
C01HBa0023B20
P023B20
Clone type
BAC
Contamination
none
Estimated length
112,006
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found