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Clone Read LE_HBa0023M24_T7_134628

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0023M24_T7_134628
Primer
T7
ID from Seq. Facility
LE_HBa_023_M24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
135 trimmed for vector and quality, 934 raw
Sequence
>LE_HBa0023M24_T7_134628 (raw untrimmed)
CTGCCACCGGGGGACCTCTAGAGTCAACCTGCAGGCATGCAAGCTTGTTGCTCAACAAGATGTGCATCCCCCTTATAAACAATTACATGGTTTTATGCTA
TCTGAATTTCCCCCTCTTCAGGTTTTCCAGATGTAGTTGTATTAAATTAATAGTTTTGGGGTTTGGGGGTGGGGTGTGATTAACAACACTCCCCCCCTCC
TCACTCCTCCTACTATCCCCCTAGCCACACAACTCCACCCCTCCCTACTCTCCAACCCCAACTCTCATCCGCACTATATCACCTTTCTTTTATTTGAACA
CCACCCACTTAACCCTCACTTTCCCACATCACTACTTCCCCTCTCCATCCTCTATCCCTCCCCCCCATAGATTCCTTCACTCCTACGCCTCACGTCACCT
CCAACCTACCTAAACTCAGACATAGATACACTACATTTTTTCTAAATTCATCCCATCCGAACCCCCACACTTTTGCTTTTAGGCGCACCTTATTAATTAT
ACTTTTCTTCTTACTTTATGTCCCATTCTATAACAACTCTTCTCATCGTATTCCTACCTATCTTTAAAAACCTCTTCTCTCACTTTATTTTTTTTCCTCC
TTCTTTCCTCCATTCTTCTCCCTCCCCCCCCCCCCCTCACCCCCCCCTTCCACCCGATTGCCCCCTCCCCTACTTCCTCCTCCCCTCTCCCCCCCTTCTT
TCATTCCACTCCCCCTACACTCACAAAGTCCCTTCCTCTCACCTACCTCCTACTTCTCCCTCCTCTTCTTTATTTTTTCTCATCTTACTTCTATTCTCCC
TCTTATCTCTCCCTCCTCATCCTCTCTCCTTCCAACTTCGCCCCTCCAACTATCCTATCCCCATACTACAATCCCAACTTCTTCTTCTGCACTTTCACAC
TTATCCCCTATACCCCCCGACCCATCCTCCCTCC
>LE_HBa0023M24_T7_134628 (trimmed for quality and cloning vector)
AGCTTGTTGCTCAACAAGATGTGCATCCCCCTTATAAACAATTACATGGTTTTATGCTATCTGAATTTCCCCCTCTTCAGGTTTTCCAGATGTAGTTGTA
TTAAATTAATAGTTTTGGGGTTTGGGGGTGGGGTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.922518
Expected error %
2.8584
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0023M24
Clone
Clone name
hba-23m24
LE_HBa0023M24
P023M24
Clone type
BAC
Contamination
none
Estimated length
108,050
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found