Clone Read LE_HBa0024J16_SP6_135235

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0024J16_SP6_135235
Primer
SP6
ID from Seq. Facility
LE_HBa_024_J16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
639 trimmed for vector and quality, 976 raw
Genbank Accession
Sequence
>LE_HBa0024J16_SP6_135235 (raw untrimmed)
AATAATTTGGTGATTTTACTTTACAAATATCACTCAAAAAGTAGAAATTACATTTACCCATTCCCAAGATCAATTATGAGATTGTAGTGCGTGTAAATAG
AGATAGTTTTCTTTATTAGTCTCAAGCTAATTATTGATTGATCTCGATTTATAATTATCTTTTCTTCAAATAATATTTCAACCAAAAAAGTGAATGGTTT
TTGTCACGATCCAAATCGGGCCGCGACTGGCATCCACACTTATCCTATTATGTGAGCGAACTAACCAATCTAACCCCAATCGTTTACCAATAATAACAGA
AAATAATGCGGAAGACTTAAACTCATTAATGGAAATCAATTAAATAACTTCTAAAAACTCAACAACTATTATTATCCCCAAAATCTGGAAGTCATCTTCA
CAAGAACATCTATCCTCAAATTACTAAAGCTAAGAGCATCTAAGAAACTAAACATAAATAATAGCTAGTCTATGCCAGAACTTCAAGGCATCAAGACATG
AAGAAGAAGATCCAGTCCAAGCTAGAAGCTTTAGCTCACCCTGAAATCTGGTGTGACGAAGACTAGCTAGAGTTGCGGTTGAGTTGAAGACGACGGCAAG
TTTGTTGCACTCCACAAATAATCAAAAAGAAAACTTACAATTAGGGTTCAGTACAAAACACAGGTACTGAGTAGATATCATCGGCCAACTCAAAAAAAAA
ACAGTATATTCAAATAATATATAAAATCAACCTACAATTACCCACATGCCACATTTCAATTTACATAACCCTTGGTCACACACCCAGCTCATAATGAGGA
ACTCACGCCTCCCCATCTACCTCATTGGGAAATAGGTTCATTAAATTGGATATATTTAATAATTTCGGGATTCTTCCCTTTGCTAATTCTGGGCCGAACC
GGGCTATTCCCATCCCACATACTTCCGGGTCCAAAAAGTCCACGATCCCATACAATCTGGGGGGCAACGGGGCGTC
>LE_HBa0024J16_SP6_135235 (trimmed for quality and cloning vector)
ACTCAAAAAGTAGAAATTACATTTACCCATTCCCAAGATCAATTATGAGATTGTAGTGCGTGTAAATAGAGATAGTTTTCTTTATTAGTCTCAAGCTAAT
TATTGATTGATCTCGATTTATAATTATCTTTTCTTCAAATAATATTTCAACCAAAAAAGTGAATGGTTTTTGTCACGATCCAAATCGGGCCGCGACTGGC
ATCCACACTTATCCTATTATGTGAGCGAACTAACCAATCTAACCCCAATCGTTTACCAATAATAACAGAAAATAATGCGGAAGACTTAAACTCATTAATG
GAAATCAATTAAATAACTTCTAAAAACTCAACAACTATTATTATCCCCAAAATCTGGAAGTCATCTTCACAAGAACATCTATCCTCAAATTACTAAAGCT
AAGAGCATCTAAGAAACTAAACATAAATAATAGCTAGTCTATGCCAGAACTTCAAGGCATCAAGACATGAAGAAGAAGATCCAGTCCAAGCTAGAAGCTT
TAGCTCACCCTGAAATCTGGTGTGACGAAGACTAGCTAGAGTTGCGGTTGAGTTGAAGACGACGGCAAGTTTGTTGCACTCCACAAATAATCAAAAAGAA
AACTTACAATTAGGGTTCAGTACAAAACACAGGTACTGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947121
Expected error %
0.2593
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0024J16
Clone
Clone name
hba-24j16
LE_HBa0024J16
P024J16
Clone type
BAC
Contamination
none
Estimated length
78,797
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found