Clone Read LE_HBa0169B19_T7_13610

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169B19_T7_13610
Primer
T7
ID from Seq. Facility
LE_HBa_169_B19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
140 trimmed for vector and quality, 852 raw
Sequence
>LE_HBa0169B19_T7_13610 (raw untrimmed)
TCGTGATCCTTTAGAAATTCGGACCCGGCGATCTACAGAGTCAACCTGCACGAATGTAAGCTTCACCATTTGCTAGGGCAATACCGTCTTGACCTTTTGT
CACATTTTTATATGGCTGGAAGAGTCTTGTAAATCCTGTATTGATGATAGGTCGGCAAATAATAATACTTTTCATTTCTCATGAAAAAGATGATTCATGT
TCGAAATGATTGCAGTGAACAGAAGTTACCAAATGTAAGGGCTGTTATTTCTCATTCACCTGATGACAAGTCAGCTACCATTGCTGGCCATGCATCTTAT
CATTATCTATCCATCCAGAGACCTTCTGCACGGACTGCTCATAAATAAGAGAATTGTTGCACCTACTGGTTAGTCATTGTTATGTGTCATAAACATGTAA
AACTAACATTTCTTATCGATTTGTTTGCCACCTTCTGGTTAACTACTGGAAGCTGTCTTTTCTCTACGGTCATCTTCCAACTGACAAGATGCTGACGTGA
TAAAGGACTGCGATAAAAAAACTTTAATGTTTATAAACCGAACCTGATTTTTGCAACTCTATTTGGACTCTAAACATATATATAGCACTGACATTTTCCA
CGACTCCTTACCCTGTTCTTGACTGACTCTCATGGTTTATTCCTCTTCTGTTTATCTCTCCCCCCTTAATTCCAAACCCTCTAACCATTTTCTCTACTAA
TATACAACTTACTACTAATGCGCTAATAACTCTAAATCACTTCTTTTTCAATTCTCCTCCCTCACTTACTTTCCACCTTACACTCTCCGTATTTTCTTTA
TCTCTACTCTTAACTCTCCTTATATACATCTTATTAACCTCTCTCCCCTCAC
>LE_HBa0169B19_T7_13610 (trimmed for quality and cloning vector)
TGACCTTTTGTCACATTTTTATATGGCTGGAAGAGTCTTGTAAATCCTGTATTGATGATAGGTCGGCAAATAATAATACTTTTCATTTCTCATGAAAAAG
ATGATTCATGTTCGAAATGATTGCAGTGAACAGAAGTTAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920395
Expected error %
0.928196
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169B19
Clone
Clone name
hba-169b19
LE_HBa0169B19
P169B19
Clone type
BAC
Contamination
none
Estimated length
135,882
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found