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Clone Read LE_HBa0026H05_T7_136654

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0026H05_T7_136654
Primer
T7
ID from Seq. Facility
LE_HBa_026_H05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1362 raw
Sequence
>LE_HBa0026H05_T7_136654 (raw untrimmed)
CATCGANACTATNCTCTGATCGCACAGAGTATACGAATCGTCGTCTCTTGTACTCTATCGCACATCTGCGGTGTAGNTGAAATATCGTATATATATNATG
TATGATACGTGAGATCGATNATCTCTCTCGATCATTATGATAGTTAGCACGCTGGTCTCATGTTGTGTGATGTNATATACGTACTGAGTTCTGTCATAGA
GCTCGATNCATCTACTGCACTGTGCCTCNTGCGCCTCATCACGCTTGTGACACAGTCATCACATACTATTTACACTTGTCAAGCTTGCACGGATNCTGCG
ATGTCGCAACGACTATCATCGTAACGACCTTANCAGAGTACGTCTGCACTCCCGCTTCGATCTCGTAGCATGTGCGTGTGCTNCTCTTNATGCTNGTNTT
GTATGTNCATGTATTCTGCTTTCTAACTTAATANATCGTGTTTATCTCTGATCTTTATATCTTATGTAAAGAGTGTATGATATCTTAGGATCATGTATAT
ACGATGTCGCGCTCCNCCTCTTCGCNACTACATATGCTCTNACTATNACACTTCTACACTATATNTANCTCGACAGACTNCATAACGAGACTNCNCACTC
TATATACTGCCTATCACACGCTGCATATATCTATTGACANGCGATAGCATGTCCNACGNAATGAACGTCTGTATGAGATAGAGTGAGTGTATCGTNAAGA
TGCTCGCATATTCATACTATGTCGTTCTNATATGTGTATGTGATACACTCGTGATGCCTATCGACGAGATGAAGCTACCTGCGATGCAACGTTAGAATTA
NATCTCGCTCGTCNGTCNTNGTGAGTGCGACTATGTGCACTTCAGTGTGCTCTTATGANGTTGTGTNTAATTAGAGTTTACTCGTGTATATTATTACGAT
ATACATGAGTCTNCGAGTAACGCGCAATCTGTGCATGAANGTGAAATCGGACGTCATAGTCGAGATGTGCTGACANCACCACTANCGATCGTAACACATA
GATAANCTTATTTTATAGTTAGACATCTCATCAGCTCTATACACGCACGCTAGGCCTATGTACGTATCTATTGTACATATCTACTTTCNATTCTGTATTT
CTCTCTACANTACACTTCTGCNTATNGTGTGACCCNATATGATNTCCANTGTATTATGCTTGTATCTATACTAGATGTCACTAATCNGTCGTACTTTNAT
GTATACTCGTNTNTGTGTTGTACNGTGATCATGTACGACGTCCTTACTCTATGTATACATAACGATTGTAGCGTCNTNACATCGCGACCGTCTAGANTAT
CAGTTCTGCACTNATCTGACTACNATAACTTTNGACTCATNCTCTNANCGCANTTANTACTN
>LE_HBa0026H05_T7_136654 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0026H05
Clone
Clone name
hba-26h5
LE_HBa0026H05
P026H05
Clone type
BAC
Contamination
none
Estimated length
115,797
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found