Clone Read LE_HBa0028M16_SP6_138451

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0028M16_SP6_138451
Primer
SP6
ID from Seq. Facility
LE_HBa_028_M16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
685 trimmed for vector and quality, 970 raw
Genbank Accession
Sequence
>LE_HBa0028M16_SP6_138451 (raw untrimmed)
GTCATACATATCTTATATGTTGTATTTTTATAAATNGAAAAATATGCTTGTCTATTATAAGCTTTTATTTCGCATTAGATTTTATATCAAGTCAATGTAA
TATTCATTTATTATGATTTAGTAAAGTAAAATGAACTATAAATTTAAATATATGATGTATATGTATTAATTTCGTGTAATTATCTTTTATTTATTATTAT
TATTATTATTATTAGAAGTTGTTAGTTAAAATGAGAAAGATACTCTATGGTTGTCGCATCTTTATCTCAAAACCAAACTAAAATAAGACATTTAAAAAGT
CATCTATGTCATGACTCATAGTCTTCTGTTTAATTTTTATATATATTTATGTGAATTTATTAATATAAATATTAAAAGTTATTGAATATGATCAAATTCA
TGTCTGACCTTTTAGCAATTACACATCGAAAGTAATGAATTTGGATCAAAACTATTAAATTATATATATCAAACTCGTATTTGATCTTAATTTTAGCTTC
GCCATAATTACGCACAAAGAGACAATAAATTTGAATTGAATTTATTAAATTTAATTGAACTCGTATTGGCTTAATTCTAGCTCCGCCTAAATTATGCATA
GAAAGGTGATTTATCAATATTCAATATGCAAACCTCATTAATATAGATATTGTTATATTCTTCACCAACCATTAAAAAAAAATTAAAAAAATAATAATAT
CCATATTTGGTTCATACGTTGTTTAATTTATCTCTTATTCCTTTTTTTTGCTTTTAATTTTAGCTAACACCAACTTAAAAAAATTGATCAATCAATATCT
CATCAAACAAGAACCCCACAGTGAGTGTAGTAGTTATAATTTTGATTAATTATCATAAAATAATTTTAAAAATGAAAAAACTTTTTCCCCTAAAGGCAGT
TTATATTCAAAAATTAATTTAATAACTATTTGTTAATTCCTTAACAAACCCAAGGGGACCAATCATATTA
>LE_HBa0028M16_SP6_138451 (trimmed for quality and cloning vector)
ATTTTTATAAATNGAAAAATATGCTTGTCTATTATAAGCTTTTATTTCGCATTAGATTTTATATCAAGTCAATGTAATATTCATTTATTATGATTTAGTA
AAGTAAAATGAACTATAAATTTAAATATATGATGTATATGTATTAATTTCGTGTAATTATCTTTTATTTATTATTATTATTATTATTATTAGAAGTTGTT
AGTTAAAATGAGAAAGATACTCTATGGTTGTCGCATCTTTATCTCAAAACCAAACTAAAATAAGACATTTAAAAAGTCATCTATGTCATGACTCATAGTC
TTCTGTTTAATTTTTATATATATTTATGTGAATTTATTAATATAAATATTAAAAGTTATTGAATATGATCAAATTCATGTCTGACCTTTTAGCAATTACA
CATCGAAAGTAATGAATTTGGATCAAAACTATTAAATTATATATATCAAACTCGTATTTGATCTTAATTTTAGCTTCGCCATAATTACGCACAAAGAGAC
AATAAATTTGAATTGAATTTATTAAATTTAATTGAACTCGTATTGGCTTAATTCTAGCTCCGCCTAAATTATGCATAGAAAGGTGATTTATCAATATTCA
ATATGCAAACCTCATTAATATAGATATTGTTATATTCTTCACCAACCATTAAAAAAAAATTAAAAAAATAATAATATCCATATTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.871565
Expected error %
0.4323
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0028M16
Clone
Clone name
hba-28m16
LE_HBa0028M16
P028M16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found