Clone Read LE_HBa0169F22_T7_13934

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169F22_T7_13934
Primer
T7
ID from Seq. Facility
LE_HBa_169_F22-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1424 raw
Sequence
>LE_HBa0169F22_T7_13934 (raw untrimmed)
TGTCTTGCTATGTATTGCTTCTCCTTTCTACGCTTCTGCGTTCCCGTGGTGTGTATCNCTTCCTTAGTAAGNTCAGCACCTCTGACCAGAGTCAATTGTC
TAAAGTCTTCTGGNTACGTACTACTTTGTTTGTATATATAGATCTTCCTAACTCTCTCTTCTCCTCATTAGTGTATTTTCGTCCGATCAACTCTCGTCAT
AATACGNAGNATATGAAGATACANTAGTCTATTAGTATTGTGCACGNCCGCGTCCTCTGTGCTCGATATTAGTCTACTGAGGCAGCCTGCTAGCGACATA
CGCGAGCAAAACATTAGATAATCTCTTTCTTNCATACGATCATACTCTCCTAATATATGGTCGTATAGCTACCAGTGCTGCGCACACTCATCGCCCGCAT
ACTGCTATAGTCGTCTCTACTCCTGCACAATTACGCAGCACAATTAGCATTCACACGCTCGAGTGGATGAGAGACTTTCGCAGCATACTCTCTAGTAGAT
CAACATTCAGCAATCTCACTGTCGTAATGAGTCGTATGTCTCCAGTCTTTAGTGAGTGAGCCATTGTAGTCATCGAGCTAGCGTCTCATTACTTGCACAC
TTATCTTCTGTACGTCACAATTCTTCTTATATCACTTGACGNACACACACATTCACTCAGTCCATACGAACATAGTCCTGCGAGCACTTATTTANGTGTG
CTTCACCAGTCAACTCTATTAATATCCCTCATCGATGTCTAAGCGGTCATGCGAACCAAATTAGATACTCCTGTACTGTAAACTACACAAGTGGTAACAC
CTCTCCTCCTATCGACGCTACTACACAGGATACCTACCTCTACACTCTCTCGCGCACTGTTCTCTCTCCTGCTCTCCTCTCCTATCCACTAATAATAGAC
AAAGGATACTATCCTCTCNATTCNATCAATACGTCACGTCTTATTCCTATGTTACCTTCTTTTGCGTACATATTAGNACACATATACTATCGTTATCTAA
CCAGATCACTAATATGCGGTGTTACACCCGGCGTATGCACTCATCTCGCTGCTCGTTCTTCTGCATATGACAAATTACGCATATCTCCTTCGTGAGCTTA
TTCGATGTAATCTATCCTTCGTCACATCACTTATCTTTCATCTCAACTAGCCGTTTATCTTAATTATTCCATCGCTCTCCACTACTGGCTCTTTTGATAC
ATAATTAATCTCCCTTACAACTTCGAGCTATACGACCTCAATNTACGGAATATCATAGCCCTAAAGTGTTACAAATCACAAACTATATACCTTTAACAAC
CCTACTTCTACTCTTNCTATAACGTATATGATAGNCTGCCCACGCTATCTACGCTAGCTCATATAAACAACTTTCCGTTCTCTGCTTCTCTCATCTCATA
ATAAGTATTCTTCTTTTTCACCTN
>LE_HBa0169F22_T7_13934 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169F22
Clone
Clone name
hba-169f22
LE_HBa0169F22
P169F22
Clone type
BAC
Contamination
none
Estimated length
99,504
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found