Clone Read LE_HBa0031K09_T7_139878

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0031K09_T7_139878
Primer
T7
ID from Seq. Facility
LE_HBa_031_K09-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
881 trimmed for vector and quality, 1002 raw
Genbank Accession
Sequence
>LE_HBa0031K09_T7_139878 (raw untrimmed)
CCACACTTGGATCCCGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCCTTCTATTCTTCGACTTTTTCCAACCTATACTTACAGAGTATAGA
AAAGTATGGGGTTATTAAAGATATTGTACTAAGTATATCTTTACGTAAAAACACATGTCAAAGGGACATTTTAATTGAAATGAGACATTCATTATATTTA
ATTAAACTCTTCATGAATATAGAAGTAAAACAACATATAAATCATAATTTAGTACATAAATAGAAGCTTCCATAATTTTTGCAGCAAACTCCACTTTAGA
GAGAGTTCACGCAAACTTACGATGAACCCATTTCATTTCAACTCATAGTGAACTCATTTACCTTGAAGTTTCCTAACTATGGTTATCCTAAACCACACTA
AGGTAAGACATGAAGAAATCTTCCATACAATCCCTTCAATACACACCTAAGCGATCCTCAAGAATACCGACCATAGGGTTACTTTAAACGGGTAACAACC
CTAAACTCAACAACAAGACACGAAGGAACATACTTACATTCAAAGACTTCACATAAGAAACCTTTTCCACTACAACCCCCAAGTTACACATAGTACAATG
TGAGAGTAGCAACTCATACAACTAATCCCACCTAGTGATCCTTGAAGATTTTCTTTGATTAGGCACACCACATTAATCATTCATAACCTTCATCATACAC
CACATGACCTTAACATGCTTTCTTCACTTTGAAGATTAAGTCATATAACTTCACTTACATCACGTAAGGACCGATTCATACATTTAAAATTAGGACACAC
CAAGACTCCTTTTAGATCCCTACCTGTGAAATGAGTAGATATCGTACGATACCACCACCATCCCAAGTAGCACACCCTTTGGGAAGAATTATTTTAGTAC
TTTCTTTTTGGGGGGCTAGCTTTAACTGAATAAACCATGAAAATTCTAACATGGAAACTCCATATTAACCCCTACGGAAAGAGGTTCCTCAATTTCCAAG
GA
>LE_HBa0031K09_T7_139878 (trimmed for quality and cloning vector)
AGCTTTCCTTCTATTCTTCGACTTTTTCCAACCTATACTTACAGAGTATAGAAAAGTATGGGGTTATTAAAGATATTGTACTAAGTATATCTTTACGTAA
AAACACATGTCAAAGGGACATTTTAATTGAAATGAGACATTCATTATATTTAATTAAACTCTTCATGAATATAGAAGTAAAACAACATATAAATCATAAT
TTAGTACATAAATAGAAGCTTCCATAATTTTTGCAGCAAACTCCACTTTAGAGAGAGTTCACGCAAACTTACGATGAACCCATTTCATTTCAACTCATAG
TGAACTCATTTACCTTGAAGTTTCCTAACTATGGTTATCCTAAACCACACTAAGGTAAGACATGAAGAAATCTTCCATACAATCCCTTCAATACACACCT
AAGCGATCCTCAAGAATACCGACCATAGGGTTACTTTAAACGGGTAACAACCCTAAACTCAACAACAAGACACGAAGGAACATACTTACATTCAAAGACT
TCACATAAGAAACCTTTTCCACTACAACCCCCAAGTTACACATAGTACAATGTGAGAGTAGCAACTCATACAACTAATCCCACCTAGTGATCCTTGAAGA
TTTTCTTTGATTAGGCACACCACATTAATCATTCATAACCTTCATCATACACCACATGACCTTAACATGCTTTCTTCACTTTGAAGATTAAGTCATATAA
CTTCACTTACATCACGTAAGGACCGATTCATACATTTAAAATTAGGACACACCAAGACTCCTTTTAGATCCCTACCTGTGAAATGAGTAGATATCGTACG
ATACCACCACCATCCCAAGTAGCACACCCTTTGGGAAGAATTATTTTAGTACTTTCTTTTTGGGGGGCTAGCTTTAACTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.946853
Expected error %
1.2531
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0031K09
Clone
Clone name
hba-31k9
LE_HBa0031K09
C08HBa0031K09
P031K09
Clone type
BAC
Contamination
none
Estimated length
121,239
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found