Clone Read LE_HBa0032A24_SP6_140195

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0032A24_SP6_140195
Primer
SP6
ID from Seq. Facility
LE_HBa_032_A24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1234 raw
Sequence
>LE_HBa0032A24_SP6_140195 (raw untrimmed)
CGCTACGCGGGCCCTTAAAGAGGCGGGGCGATCATCATCCTCATATCACCCTACCTCACTCCCTCTACTCACTCTCCAACATCAACTNTACCTCTNTAAC
TTNACTCCCCACCCCCTTCTTGGCGGAGGAGGCCAATGTCTCCGTTGTGCCTCTGACCGACGAGCCAGACTCCCGTTTCTGGAGGGGGCCACGACCCTGC
CTCATTTCCATATGCCTTCCAGACGATACAGACAGATCTCTTATGCTGCAGCATGAAATACACCCAATACCGAAATCTGTCCTCCTCTACAAGACTGTAT
CTCTGCGCGAGCACAACATTGACACAAGGCACTCCGCACTGACCACGAGACGTCGTTACATCAGACGAGCACACCTGACTCACGGCACAATTCCACGGAT
CACAACCACTAATGAAAATAAACTATGAACTACACCGTCATAAAGCATACGAATGACTCCCCATCGCGGAACCAAGCCAAAGTGACTCCTGTGACAACGC
ACGGCTCTCACGCAAGACAGTGATGCCATAGCTAACCAAATGCACCTCGACCCAAAGCAGCTCTCAGGATGTTCTTGCCGCCCACGACAATACTATCCTA
ATGTAACACGCCTACTGTACCTCCATCTCTATGTTCCAATAACGAGCGTACACGACGATGTCAGGGCAACGGAACACTCAGGAGGGACAACGAGGTAGGC
ACCAAAAGTTTTTAACTTCCTGCCATCTCCCCGTGCCCAACGAATAAGCGAGGAGAAACATACTACGGCTGTACAAATCAGATCAAACGACTCACGCCCC
GCGAAAAGCACTTCACGCGCAACACCTACCATTCCAACCAGTGTGCTTTTCTATCCACCTCAACAGCACCTGTCCAGACTCCAAACGTACGTGGACACCC
TCTGGCACAAAAGACATACATGGCAAAGAGAGGAAGTACAAATCATTGAATAAGCATACTCGATGAGAACGCAAGCCCCCCCTGGCTCTAGTATCCATCA
GGGTAGGGCCCTATGCGCACACCACGCGGAGAATACGCCAGCCACGCTCCGCAACCTTCCACTCAGTCACAAGCACACTCCCGNAGTGAAAGTCTNCACT
ACGATACCGACCGCCCGCAAACACGTGAACGTCGCCCACGCAACAATCATCGCCGCTCCCCCACTTTCNGTGTAACAAAATAACCTCACCACCANCATGA
CGACGTTCGACGCAGAGAAGAAGGGTGGGAGGGG
>LE_HBa0032A24_SP6_140195 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.4141
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0032A24
Clone
Clone name
hba-32a24
LE_HBa0032A24
P032A24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found