Clone Read LE_HBa0032G03_SP6_140441

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0032G03_SP6_140441
Primer
SP6
ID from Seq. Facility
LE_HBa_032_G03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1063 raw
Sequence
>LE_HBa0032G03_SP6_140441 (raw untrimmed)
TTTATAGTTTTTGCAATTTAACCCTCCCCCTCCCCCCTCCTCTTTCTCTTTACCATTACTNTGTCGTTCCTCCCTATCCCCCACCACANCAATCCTATTG
TCAATCTTCGTATTAGATTAGAATGTCCACTTCATATATCGCACAACAAACTCTTGAATGTCCACTATACATCCATTCTCTGATGCGAGACATGTGTTAA
CTGATAGTTGCGATCTATAATAGATGGCCATTGTTTCCTATATGTCGAGCTTCTGGTATTACTGACATCGGTCGGATAGCTACGTTGCATCTCTCATGTA
TTGGATCTCATCTATCCTTCCGAAAATAATCTTCTGATAGTTCTTCCTTCTTGTACTTCCTCAGACTCCATCCTCTAAGCAGCTCTCATGATTCCTTATG
AGTAAAGTTTCGCTCTATCGTAATCT
GCAATATTTCTTCGATATAACCCTTCCTATTGTAATTCGAACAGGCGAAAAAGTTAACTTTTGTCTTACATACA
TCGTATAAAAATATGAAAATATACGATATCTCCATTTTATTTTCAATCTTCGTACTTAGAATATCCCATATTTTTGTTGTCTTTAATACATGATAACTGA
TAAATTTCTAATATTATTACGAGTTACTAAAAACTGAAGTAAGGAAAAATAGTACTTAATTCTTTAGGACAACCTGACCTAAATAAGCAAAACGTAATCA
CTACCCTTCCCATTACCATTTTTATAGTTCGTCCATACATCATTTAAATAATAACTTGTTTCCTAAAAATACTTTGGCAATCTTTAAAAATATAATAGAA
TAGAAATTAAGCGATACTCTTTTCTCAACTTTTGCCTTTTTACCATTCAATTTCTTTCCTATGCATCTAAGTACAAAAAAATAATTAATATAAAATTATT
AAATCCGTTTCATGGCATTTAATATCACATCCTTATTTAGTTCTTTTTCTTATGGGTTTATGGTCCAAACCTTTATCCTGGACAACTTTCTTAATAATTT
CAGTGATATTATACTTATCTTCTTTTTTTCTTTTAACTCTAATAATTCGTTTAACTCTTTTTT
>LE_HBa0032G03_SP6_140441 (trimmed for quality and cloning vector)
GCAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.3237
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0032G03
Clone
Clone name
hba-32g3
LE_HBa0032G03
C06HBa0032G03
P032G03
Clone type
BAC
Contamination
none
Estimated length
125,024
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found