Clone Read LE_HBa0032I24_SP6_140579

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0032I24_SP6_140579
Primer
SP6
ID from Seq. Facility
LE_HBa_032_I24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1216 raw
Sequence
>LE_HBa0032I24_SP6_140579 (raw untrimmed)
TTAAAAGGTGTGGTCCACAGGAAAGAAAGGGGGATAGTGGTCTAGTCGTAACTTGATTGCACCCGAATCTATCGCGCCTAAATCGTCAACTTCACCGATA
TACAACCCTTTTCCGGCGGTGTAGGCATACCAAGCAGGCCGCTTTCTCAATATGTATTTCATCGCCCCGCTCTCCTGCAGTAGGAAGTACTTACGCTCTC
GAGTTGAGCTATCATTCATTCTGATAGAGCTTCGATGTGTGGGTAGCGCCTTCGTGCAAAGAATAGACGGCTGACACTCATATCCAAAATCGAACTCATC
TAGAGCTAATCTGCTCTATGCGTATGTCGCTAGCACAAATATGTCTCACATACTGCTCTTTTCGGTTATTAGTATTCGTATGGAACACGCTACCTCTGGT
ACGCGCTACTGAGACGAAGAACAGTTCCACTTAAGCTTAGGCTGCGCCAATGTGAGAATAGTTGAAGTGTATCATAGGGTGCGCTTCGAGTCGATACACA
GACTTGGTCAAGTCCTTCTCATCATGTCATGTGATGACAATGGCAATACTACTACTCTAATCGCCTTATTGACGANTCCAGAAGTACAACAGGTCAGTGT
CCTGCTCCTACCATCAGGATTTATACCACTACGTACGACTCTACTCTTAACACTTAGTATGGTGCTATCGTGTGCATCTATAGATGAAGGGCTAGTCCTC
GTGGAAACACATACACCATCTTGTGCCATGTGGTTGCAGTGTTGCGGTTCATGGCTCTACCTATTTTACTCAGCACAAAGGGTGTTAAGCGACTGGCTCG
GATAAAAAACGGGGGCATGGTTGCATGTCGTTTTCCTTTCTAGAAGTCATTGCGTATAACTTTTCAATCTGGCCTTCTTGGGTAGTTATCTCTTTTGGGC
AGAACTGTGGGTAGCTACGTAATGCATGGTCCCCTCCTCTTTTTCCAATTTCTCCAGTCCAGCGAGCCGAGCTTGGTTCTTATAAATCAGTACTCTTGTA
ATACCATGCGAATCCGAGATTCTTGGGAGAATGTTTTTTTATGTGTTTGGATTTNTCTCATACAGATAAATTACAACGACGAGACTATCTCTTCGTCAGA
GACGGCGACGTAGTCGTGGAGTGGCCCTCGACTTTTAACGNGCGGTATGTGAGGTGGGGGAATCACACAGGTTAACCTGCTTCGTTATAGCTTATAGGTG
GGAAAGGGTGGGGTAT
>LE_HBa0032I24_SP6_140579 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.7802
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0032I24
Clone
Clone name
hba-32i24
LE_HBa0032I24
P032I24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found