Clone Read LE_HBa0169I23_T7_14080

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169I23_T7_14080
Primer
T7
ID from Seq. Facility
LE_HBa_169_I23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1156 raw
Sequence
>LE_HBa0169I23_T7_14080 (raw untrimmed)
CCTTTTCTTAATACACGACAACCGCGCGACACCATATGACGCCGGTAGAATCGAACGTTNACGTGTTTNGCCCTTTCTCCATACACACACCCCGTATTCG
ACATCGCAACGTACGGTAGAAGGGGAATTAACGGGGCGTTACGTTTAGTAGATTAAAAACTCGAAGTAGACATCTTTCTCGCTGAGGATTCACTGCACCC
ACTACGATAGATCATNCTAAAGAAAGTATGGGGATAATGAAACTAGATATTGACATAGAAACATTTAATGAAGGTTGTACACCAGAAGATACTTAATGAT
AGTATAGGAATGAAGGATTGCAAATATAATGCTAGATTAATATCTATAATTCTAGGAGACACTATATAAAGTATGAATTTCGATGGACGTCTCAAGTAAT
ATAATATACAGTCCAGATGTCAAAGAGACGAAAGACTGAACTGACAGATAGAGATGTATACCACACACAAATGACCTTTATATCATGTTATTATAGTAGT
CGTTAATTGCTATCAATTATAAACCCCCCCCTCCTTCGTGGGGGGGGTGGGGAAAAAAATAAAAAATAAATATTATTTTTTTCTCTCTCCCACCCCAGCA
TAACGGATTGTAGTCTATATTATCATCAGGTCTCAACGATAAACACAGTGAGAACAGGTATTGGCGTTTCGTAACTTACGTACTTGATCATTCTCATTAC
TTAATTTGACAGATATTATAGGAGCACGTTATGGTGAGGGTTACGGATGCGCACCACTCGCTCACCACAGCCAATTGGCGACACTGAAGACCACGGCGTC
CTGATCCATCTTTATAATGTCAGTGCTACCACACTTATCCATAACTAATATACGGATGTCTCATGGTAAGCTGTGTAATCTGCACGGTTCGAGAGGAACT
GTTATACTGTCTTATCTATCTTTCTTCTGGAGTATAGAGATGTCTTGTCCCGTCCTAATTGTCTATCAGTTAGCGTTATTGAGTATCGCCTGAAAAGCAC
GATTGTAGGAGTCGGGACTATAGTATGTATCGGTGATAGTGTGCTGTAGTCCAATTAGCTATCGACCCGATACACCTACTGCACAGTAGCAAAGTAACGA
CAGATCTATCACATGTCATGAACTATCGATACCCATCGTACACTATTGCTACATAT
>LE_HBa0169I23_T7_14080 (trimmed for quality and cloning vector)
GGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.06403
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169I23
Clone
Clone name
hba-169i23
LE_HBa0169I23
P169I23
Clone type
BAC
Contamination
none
Estimated length
106,210
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found