Clone Read LE_HBa0169J16_SP6_14113

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0169J16_SP6_14113
Primer
SP6
ID from Seq. Facility
LE_HBa_169_J16-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
595 trimmed for vector and quality, 834 raw
Genbank Accession
DU032549
Sequence
>LE_HBa0169J16_SP6_14113 (raw untrimmed)
AATTTGTGAACATATCCACATGTAGGGACAAGAAGAGGGATGCAATATTTTTTTAACTTAATAACATCTCCCCTTATGGTTTTCTCTCCTAATTTTCAGG
ATGCTAGTGGTGATCCAAAGTATTTCAGCTCAGAGCTCGGGTTCAAGCTTTAGGTTTAAATTTATAGCTATTGTCAATGTATTATATTATTAATAGTAAA
TAATATCGTCGTTTTTGAAAGTAGGTTTTTCTTAATCAATATTTTGTTTTTGAGAAAAATCTTTTGATACTAACCTAGATTTATATTTATTTAGATCCAT
CAAGATTAAGTTTTTTTTGAAAATTAATTTACAGTCAATAGGCTTTGCATCAGGAGGTAAGTCAGTTAAAATCTATATCTTTTTTCCCCCCCAAATTGAT
TTTCATTTTTATTGCCTTCGAAGAAGATATAACTTCAAAATAATTTAAGGGTTCATTGTCAGCAAAAAAAGTTCGGAAATTATTTCCATAAGAAAAATTT
TTTTTATTTTCTAGCTTTTGCTCCTTCGCAGTTCCTCAATATTAGAGGAATTCTCATTATTTCTTTTAACATGTGCATGAGAAGTTTTATTATACAGTGA
AAATGTTCAAAAAATCCAGCATCTGTTCTCTCAATAATAGTTATTTCAATCAAGTACATCACTTTTTCAACGCAAGGAAATCTATATGCAAACAAAATTT
TCAGTATATCTCATATGTATGCAATCAACAGTTTTTAAAACCTCTTTTTCTTCTTCTAAGGTTTAAGGCAATTTAAATTTTAATATTGGCACTTACACAT
CTTTTTAAATATTTTTTAATTAAATCTCTGAAAT
>LE_HBa0169J16_SP6_14113 (trimmed for quality and cloning vector)
TAGGGACAAGAAGAGGGATGCAATATTTTTTTAACTTAATAACATCTCCCCTTATGGTTTTCTCTCCTAATTTTCAGGATGCTAGTGGTGATCCAAAGTA
TTTCAGCTCAGAGCTCGGGTTCAAGCTTTAGGTTTAAATTTATAGCTATTGTCAATGTATTATATTATTAATAGTAAATAATATCGTCGTTTTTGAAAGT
AGGTTTTTCTTAATCAATATTTTGTTTTTGAGAAAAATCTTTTGATACTAACCTAGATTTATATTTATTTAGATCCATCAAGATTAAGTTTTTTTTGAAA
ATTAATTTACAGTCAATAGGCTTTGCATCAGGAGGTAAGTCAGTTAAAATCTATATCTTTTTTCCCCCCCAAATTGATTTTCATTTTTATTGCCTTCGAA
GAAGATATAACTTCAAAATAATTTAAGGGTTCATTGTCAGCAAAAAAAGTTCGGAAATTATTTCCATAAGAAAAATTTTTTTTATTTTCTAGCTTTTGCT
CCTTCGCAGTTCCTCAATATTAGAGGAATTCTCATTATTTCTTTTAACATGTGCATGAGAAGTTTTATTATACAGTGAAAATGTTCAAAAAATCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.910778
Expected error %
0.512842
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0169J16
Clone
Clone name
hba-169j16
LE_HBa0169J16
P169J16
Clone type
BAC
Contamination
none
Estimated length
107,679
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found