Clone Read LE_HBa0004P04_SP6_1494

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0004P04_SP6_1494
Primer
SP6
ID from Seq. Facility
LE_Hba_004_P04-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
607 trimmed for vector and quality, 1190 raw
Genbank Accession
Sequence
>LE_HBa0004P04_SP6_1494 (raw untrimmed)
GCCCTACTTTCAATTTCAGTGTCATTAGCTGATTGCCAAGCAGGAATCATGGCAGCCTCTCCATATGTACTTAGCTCACTATCATGAAATATGTTTTCAA
TTAACTGCTGACTTTCAGTGTTAAAACTGGTAAGAGAAAATTGTTGATCATTGGTGTTATTGATGCTATTAGAAGGGTGGTAAATTGATGATTGAGGTTG
TAAATTGGGAAGGTTATATATATATTCATTTAGGTATTTTGGTACAGAATGTGTCCTACTTGTTCTTCTAGGTGTATTGGTTGATCTTTGTGAACTGGAA
ATGGTAGTAATAGGTTGTTGTGAACTGGAGGTAGAAGTATTAGAAATGGTAATATGTGGAGATATTTCTGGATTAATTGATGGAGTAGTATTATCAGTGT
GTGGTAAGTTGGCATTAACAGAGTTATCTGTGACAGTAATCAGGGTGTTTTCGTTCAAATCATGAACATTATTCAAAGGACTGTTTGTGCAGTTCAACAA
TTCAAAATTAACATCAAGACACCTCAATACAGAATTAAAACTAGAATCAGGAAAAGAAAGAGCGAAAGGAAAGATACTTTCATGAAATAAGACATCTCTT
GAAATATGTATTTTCTTGGTGCTCACATTTAAGACCTTGTATCCCTTTGTGTTGAATGAAATAATCCAATGAAAATATGAGGAACTGATCTTAAAATTCC
AACTTATCCCTTTGTGAGTTTTTAGAGTGATAGGATAACAATGACTGCCCAATAAATCTTTAGGTTTTGAAAATGTCAGGCGGTTTTTTGGTATATTACC
TCAAAAAGAGAGTTTTGTTTTTGATTGGCTTTGGAATGGTAATTCGGCTCACTCGTTAGGGTTGCAGCAAAAAATGCATTCCCCCTAAATATTTCATGGG
AAATTAGAGGCTTTTTACAATACAATTTACGCCATTCCAAAGAAAAACTATTGCGTTTAATATCTCTACCCTCACATTTGTTTCAAGGGAGACATGGGCC
AAAATTTTACTCAAGTATGCATCTCCTCGTCATCACACGACACAAAAATCTCAGCTCTCTTAAACTACACAAATCCACAAAAAATAACACTCCTCAATAT
TATCAGATCGGTTATCTNTATACCATTATCTTCTTACCCGACACTTTTGCAAACCATGTCTTCTCCTCCCGCAGGAAGTACTTTACTCCC
>LE_HBa0004P04_SP6_1494 (trimmed for quality and cloning vector)
GCAGGAATCATGGCAGCCTCTCCATATGTACTTAGCTCACTATCATGAAATATGTTTTCAATTAACTGCTGACTTTCAGTGTTAAAACTGGTAAGAGAAA
ATTGTTGATCATTGGTGTTATTGATGCTATTAGAAGGGTGGTAAATTGATGATTGAGGTTGTAAATTGGGAAGGTTATATATATATTCATTTAGGTATTT
TGGTACAGAATGTGTCCTACTTGTTCTTCTAGGTGTATTGGTTGATCTTTGTGAACTGGAAATGGTAGTAATAGGTTGTTGTGAACTGGAGGTAGAAGTA
TTAGAAATGGTAATATGTGGAGATATTTCTGGATTAATTGATGGAGTAGTATTATCAGTGTGTGGTAAGTTGGCATTAACAGAGTTATCTGTGACAGTAA
TCAGGGTGTTTTCGTTCAAATCATGAACATTATTCAAAGGACTGTTTGTGCAGTTCAACAATTCAAAATTAACATCAAGACACCTCAATACAGAATTAAA
ACTAGAATCAGGAAAAGAAAGAGCGAAAGGAAAGATACTTTCATGAAATAAGACATCTCTTGAAATATGTATTTTCTTGGTGCTCACATTTAAGACCTTG
TATCCCT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935157
Expected error %
0.105437
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0004P04
Clone
Clone name
hba-4p4
LE_HBa0004P04
P004P04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found