Clone Read LE_HBa0073D14_SP6_16682

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0073D14_SP6_16682
Primer
SP6
ID from Seq. Facility
LE_HBa_073_D14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
561 trimmed for vector and quality, 919 raw
Genbank Accession
DU034574
Sequence
>LE_HBa0073D14_SP6_16682 (raw untrimmed)
GGCAAGGTTTGGGTATCGACTATCCTCATCTGACGTTCAGCAGCTACACTACGCTGCCACCTACTGACCGTCACAAGCACGATGGACCGTCATAACCTCC
GTAGGTGGTCTCTTCTACATTTCATCGCTCAAAATCTCCGCATTCAGCTTTGGACAAATTTCCTGCAGAATAAATAGAAAATAATATAAAAATTATCACA
CAAAGGCATTCTTACACACTAAACTTAGAGAGAAAAAATATTAAAAATACTGTGAAACCCCGGGATATCAGGACTCTCCCACCAAGGGGAGTCGAAGTTC
ATCAAAGGGTCATTATGATAGGATTCCCATGCCCAAAGTTAACAAAAACAGTGATGTAAATATACCTATGGAAAGGCCACCTTGTAGGAAGTGTGGCAAA
CTTCATGACGGAGACTCTAACAATGGCACTGGAAACTGTAACAGTTCTGGAAAACCTTGTCACATGATAAAGGATTGTACGTACATGAAAGCTCGAGAAA
AAGGGAAGGAGAAAGTTCAACCGCATGGTTCAAGTGAAGAGGCTCCAAGGAAGCATCGATTCTTTGCACTCAAGTCTAGAGGGTAAGGGAAGACACCTCT
GGTGATATCTCGGGTGCGTAGCCTAAATTATTTTTACATTTGGATGGGTTTATGCACTACTATTAAAATATGTTTGAGCCATCATGTTGGTTTATGAGGT
ATAGTACTTTATGTCCTTATTTATGTTGTATGATTTGAGAAGAACATTTTACGAAAAATTTCCTTATGTAACTCGGGGGGAAATAAAGGTCACAAGATAG
CATTGTCAAATAGAACGCAACTCAGAATAGGGGTAGCCCAATCCAATGTCCTTTACATTGGGTTGAACAAACCTAAGTGATCCCCTTTAGATGGGAGGCA
CTAATATCACCGACGAAAA
>LE_HBa0073D14_SP6_16682 (trimmed for quality and cloning vector)
ACTACGCTGCCACCTACTGACCGTCACAAGCACGATGGACCGTCATAACCTCCGTAGGTGGTCTCTTCTACATTTCATCGCTCAAAATCTCCGCATTCAG
CTTTGGACAAATTTCCTGCAGAATAAATAGAAAATAATATAAAAATTATCACACAAAGGCATTCTTACACACTAAACTTAGAGAGAAAAAATATTAAAAA
TACTGTGAAACCCCGGGATATCAGGACTCTCCCACCAAGGGGAGTCGAAGTTCATCAAAGGGTCATTATGATAGGATTCCCATGCCCAAAGTTAACAAAA
ACAGTGATGTAAATATACCTATGGAAAGGCCACCTTGTAGGAAGTGTGGCAAACTTCATGACGGAGACTCTAACAATGGCACTGGAAACTGTAACAGTTC
TGGAAAACCTTGTCACATGATAAAGGATTGTACGTACATGAAAGCTCGAGAAAAAGGGAAGGAGAAAGTTCAACCGCATGGTTCAAGTGAAGAGGCTCCA
AGGAAGCATCGATTCTTTGCACTCAAGTCTAGAGGGTAAGGGAAGACACCTCTGGTGATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.973915
Expected error %
1.97655
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0073D14
Clone
Clone name
hba-73d14
LE_HBa0073D14
P073D14
Clone type
BAC
Contamination
none
Estimated length
51,131
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found