Clone Read LE_HBa0077M10_SP6_18642

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0077M10_SP6_18642
Primer
SP6
ID from Seq. Facility
LE_HBa_077_M10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
561 trimmed for vector and quality, 938 raw
Genbank Accession
Sequence
>LE_HBa0077M10_SP6_18642 (raw untrimmed)
AAAAAAAAGGTNTCTTNACTAGTGACGAATCATAATTGTTCACTTTGTTNTTCTANTTCTATATCACTTTGATGTTCTAAAGTTGATCATTTTAAGTTGT
ATAGAGTAAGAAACATGCACCATCGGTCCATCCGTGCATGCATATTGTGGACGATTTGGCTGGAGTGGAAAAATAAGATAGTTTGAAGGCTTACCAAACC
CCTGTACATAAAATTTGATACAGATTCGTGTATTTCGGCTTTCTGGTGTAAGATAACAGATGTATATGAGTTCCTCAGACCTGAGATGTTTGAAATAGGG
AAGTTCTAAATTTTTGCCATGTACAAATTACCTGCTAGGTGCCATCTCTGAAATAAAGTTACTTTTACTTGTAAAGCAAAACAATATATTTTATCAAATT
GTTGGAGGGACTAAGTTACAACACTTCTAATCCAGTTGTATATATTTGCACACATGATATTCATACTTGCATAGTATTCTATTTTCTTTCAGCCTTTTTT
GTGAGGATGTCGGGGTTGGTGGTGGTCTGGTGAACTTGACGGAAGAGAACTGTTGCAAATGTGTTGAAGGAGGATGGATATTTGAACTGTTACCTTACCT
GGTACCTGCCTGCTGGTGGGAGGTGGCAGGTATCCTGTGGAATTAGGTTAGGTGCGCAAAAACTTGTCGGACCCCACGGTCATAAAAATACATAATTTAG
TCGCTGCTAAAATAATTGTAGTGTAAGAACCTACAATTTTTCCCTAGGTAACCCTTTGGGGAATAAAGAACATCCGAAGATTCCTCTAAACCGCTGAATG
CGGGGAGTCTCTATTCGCGGAAGAGAGGCACGCGGGCTTTATTCTTCCCTTTCAATCCCTTATGCTATATTACGGTTGCCCTCACTCTCCTCTCCTGATT
CTCCAACCTCTAACACAACCCAACATACCCACACCATC
>LE_HBa0077M10_SP6_18642 (trimmed for quality and cloning vector)
TATATCACTTTGATGTTCTAAAGTTGATCATTTTAAGTTGTATAGAGTAAGAAACATGCACCATCGGTCCATCCGTGCATGCATATTGTGGACGATTTGG
CTGGAGTGGAAAAATAAGATAGTTTGAAGGCTTACCAAACCCCTGTACATAAAATTTGATACAGATTCGTGTATTTCGGCTTTCTGGTGTAAGATAACAG
ATGTATATGAGTTCCTCAGACCTGAGATGTTTGAAATAGGGAAGTTCTAAATTTTTGCCATGTACAAATTACCTGCTAGGTGCCATCTCTGAAATAAAGT
TACTTTTACTTGTAAAGCAAAACAATATATTTTATCAAATTGTTGGAGGGACTAAGTTACAACACTTCTAATCCAGTTGTATATATTTGCACACATGATA
TTCATACTTGCATAGTATTCTATTTTCTTTCAGCCTTTTTTGTGAGGATGTCGGGGTTGGTGGTGGTCTGGTGAACTTGACGGAAGAGAACTGTTGCAAA
TGTGTTGAAGGAGGATGGATATTTGAACTGTTACCTTACCTGGTACCTGCCTGCTGGTGGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962862
Expected error %
0.349182
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0077M10
Clone
Clone name
hba-77m10
LE_HBa0077M10
C12HBa0077M10
P077M10
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found