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Clone Read LE_HBa0142L01_T7_199934

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0142L01_T7_199934
Primer
T7
ID from Seq. Facility
LE_HBa_142_L01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
140 trimmed for vector and quality, 748 raw
Sequence
>LE_HBa0142L01_T7_199934 (raw untrimmed)
CCCCTATTATCACGGCAATGTAAGTACTCACACCTTGCCACCCTACGGACCGTACATAGTCACGACCCAAACCTGGGTTGCGATCGGCACCCACACTTAC
CCTCCTATGTG
AGCGAACCAACCAATCTAACCTTAACATTTCAATATAATATCAACAGAATGTAATGCGGAAGACTTAAACTCATTAAATAAAGACCAAT
TCTTTAACTTCTAAAATTCAACATCTATTATTCCCCCAAAATCTGGAAGTCATCATCACCAGAACATCTACGATCAAATGACTAAACTAAGAATATTCTA
AAATCTAAAAATACATAAGAAGCTAGTCCATGCTCGAAGCTCATGGCCTCTAGAGCTCAAGAACAAGATACAGTCTAAGCTAGAAGCATTAGGACAGGTT
GTTTATCAGAAGCCCGCAGATGGGTTTATATTTAACCTAATAAAAGACGAGGGCCCGGTGCTGCACTCAGAGATAATATGATAAAGACTCTAGTATGGTA
AGAAGGTAATCGGAACTGATAGCATCAGCGGAAAAAGCAATGAAAGACAATTCCAGGATTCCGATAACATCATGGTGCTCCGTGCTCACGACAATAGATG
TGGTGTCTACCGTCTCTCTTTATGTTATTACTTTTCAACATGATTGTATAGCTGTTAAACATATGTCAGATTAGTAGGTTGTTAATTTTATTCTTATTCA
TGCCTTGCTTGTATTTTTTGTTGTACTCTCTTTCTTGTCGAGTCGGCT
>LE_HBa0142L01_T7_199934 (trimmed for quality and cloning vector)
AGCGAACCAACCAATCTAACCTTAACATTTCAATATAATATCAACAGAATGTAATGCGGAAGACTTAAACTCATTAAATAAAGACCAATTCTTTAACTTC
TAAAATTCAACATCTATTATTCCCCCAAAATCTGGAAGTC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.875465
Expected error %
2.66418
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0142L01
Clone
Clone name
hba-142l1
LE_HBa0142L01
C08HBa0142L01
P142L01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found