Clone Read LE_HBa0155H12_SP6_200795

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155H12_SP6_200795
Primer
SP6
ID from Seq. Facility
LE_HBa_155_H12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
136 trimmed for vector and quality, 580 raw
Sequence
>LE_HBa0155H12_SP6_200795 (raw untrimmed)
CCGGCTTGAGCAGGAAATAACCACTTTTTCATGTTGCTAGGAAGACTTGGGAGTTATGAGAAAATGTGCGAGATTCATGGTGTATGTTCGCTTCAATGGT
ATGGTGTTGGAGAAGAAGCGTTAATATGATGAAGAAGCTGAATATTTTTATTTTTTATTTTATTTTTAGTAGACGAGTAGAAATCCCAAACAAATTTTGT
ATACTTTAATTTTAGAGGTCCAAAATTACCCATGGTACACCCCTTCATTATTTTAATTTAAATTATATCTTTGGAAATTTAAAAAAAAATTTTAAGGTTT
TCTAAAAAAGGGGGCCCCGTTTTTTTTTTTAACTTGCCCCGTTGGGAAAACCTTTTGGGTTTGCCAAACCCCCTCCTAATCAAAATATTTTTTTTTCCCG
GGTAAGGGTTTTATTTTTTTTCTCAATTTTCCCATGGGATTTTCAATAAACCCGGAATGGTTTGTTTTATTTGGTGGCCCCAATTATCCCCAGGATTTTC
TTTTTGAGAAAGTTTCGGCACCTTTTGTGTTTTTGGGGTGTTCTTCTCTTTGGTTTGTTTTTTTTTCTCCTTTTTTAGAG
>LE_HBa0155H12_SP6_200795 (trimmed for quality and cloning vector)
TTTTTCATGTTGCTAGGAAGACTTGGGAGTTATGAGAAAATGTGCGAGATTCATGGTGTATGTTCGCTTCAATGGTATGGTGTTGGAGAAGAAGCGTTAA
TATGATGAAGAAGCTGAATATTTTTATTTTTTATTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.878756
Expected error %
2.85165
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155H12
Clone
Clone name
hba-155h12
LE_HBa0155H12
P155H12
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found