Clone Read LE_HBa0161O23_T7_201922

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0161O23_T7_201922
Primer
T7
ID from Seq. Facility
LE_HBa_161_O23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
43 trimmed for vector and quality, 506 raw
Sequence
>LE_HBa0161O23_T7_201922 (raw untrimmed)
AATTCTCAATCGCCTTCTCCCCCTTTAACAAGGGAATTANGCGCTCTAACTGCATGCTTATTCTCAATGTCGGTGAGGCACCCCTTTTTGTGCAGACTCC
TTCTATAAAAACATGTTGTCTATCTTTTTTGGATGGATTCCAATAACCACATACTACTTCGTACAAGTTATGGTAAGTAATCTTGTCGCAATCACACTGC
TACACTAATTGGTATTAGTAGTAATTCTAAGGTCCTATTCACTTGTTTCCTTTATTATTTTTTTTGTTATTATATTTATTTTTCTCTAACATGTACGATA
TCCTACTGTTGCACTGTATCCGGTAAATCTCTATGTTTATGGCTATGTATCTTTTTTTGTTTTTTTTATTTTTTTTTTTTTTGTTTTTTTTTTTTTCTTA
TCTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTATTTCTTTATATTTTTATTTTTTTATTTTTCTGTTCTTTT
CTTGTT
>LE_HBa0161O23_T7_201922 (trimmed for quality and cloning vector)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.0690489
Expected error %
0.937343
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0161O23
Clone
Clone name
hba-161o23
LE_HBa0161O23
P161O23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found