Clone Read LE_HBa0174M11_T7_202954

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0174M11_T7_202954
Primer
T7
ID from Seq. Facility
LE_HBa_174_M11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
741 trimmed for vector and quality, 789 raw
Sequence
>LE_HBa0174M11_T7_202954 (raw untrimmed)
ACCTGGGACCCGCGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGCGATGTCATCAAGATTTGAACTTTGAGTTGTTTCAAAAGAGAAACAAGT
CTGGTCCAGAGATTCATCAAAAAGATGTTGCCTAATCAAATCAAGTGAAGTACAAGTCTCTTGTGGAGAACCCATTTTTTTCTTTAAAGGGAATGTTAAA
ATTCAAACTTGTGTGAGTTGAGTGGAAAAAGAGTGTGTTGAGGGTTGATTATATAGAGTGGAAATTTGAAGATTGAGAAGAGGGTTCCTAGGAGGCCTCT
AAGATGGAGAGAGGAAGCATCATGTGGGGTGGGGTAATTTATAAACCTTTATTTTACTGTTGTACACCAATTAAATATTGCTAACCCGTCTATTATTAAT
TATCATATTTTTTATTTTTAAAATTAAATTATTAAAATTTTGATTAATATTTTACGATATTTTTTTATAATATTAATATGTAAAAAGTTATAATGTATAA
AATATAATATTTTTTGTATAATTTTTGAATATTTAAATTTTTTATTTAGTATATTGAATTAAGATACTAATTTAACTATAGATATAAAAATATAATATGA
CAAATAAAAATAAACGGAGAAAATATATGTTATAATATTATTATTTCAAAGAAATGATGTGGGACAACAAAGTGATGATGTTTGCTTTGTTTGTTTGTCT
CTTTTGTTGTTGTTTTTCAATAAAAAAAGTTGGGTATTGATGGATGAGTTATCTCTTCCACCAAAGAGTTGTATTTTCTAGGGTTGCTT
>LE_HBa0174M11_T7_202954 (trimmed for quality and cloning vector)
AGCTTGCGATGTCATCAAGATTTGAACTTTGAGTTGTTTCAAAAGAGAAACAAGTCTGGTCCAGAGATTCATCAAAAAGATGTTGCCTAATCAAATCAAG
TGAAGTACAAGTCTCTTGTGGAGAACCCATTTTTTTCTTTAAAGGGAATGTTAAAATTCAAACTTGTGTGAGTTGAGTGGAAAAAGAGTGTGTTGAGGGT
TGATTATATAGAGTGGAAATTTGAAGATTGAGAAGAGGGTTCCTAGGAGGCCTCTAAGATGGAGAGAGGAAGCATCATGTGGGGTGGGGTAATTTATAAA
CCTTTATTTTACTGTTGTACACCAATTAAATATTGCTAACCCGTCTATTATTAATTATCATATTTTTTATTTTTAAAATTAAATTATTAAAATTTTGATT
AATATTTTACGATATTTTTTTATAATATTAATATGTAAAAAGTTATAATGTATAAAATATAATATTTTTTGTATAATTTTTGAATATTTAAATTTTTTAT
TTAGTATATTGAATTAAGATACTAATTTAACTATAGATATAAAAATATAATATGACAAATAAAAATAAACGGAGAAAATATATGTTATAATATTATTATT
TCAAAGAAATGATGTGGGACAACAAAGTGATGATGTTTGCTTTGTTTGTTTGTCTCTTTTGTTGTTGTTTTTCAATAAAAAAAGTTGGGTATTGATGGAT
GAGTTATCTCTTCCACCAAAGAGTTGTATTTTCTAGGGTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.891643
Expected error %
0.428717
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAS72389.1| Score 89 E Value 9e-17 Identity 32.60% Align. Length 128bp (17.27%) Frame 3
ethylene response factor 5 [Lycopersicon esculentum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0174M11
Clone
Clone name
hba-174m11
LE_HBa0174M11
P174M11
Clone type
BAC
Contamination
none
Estimated length
93,743
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found