Clone Read LE_HBa0079P03_T7_20309

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0079P03_T7_20309
Primer
T7
ID from Seq. Facility
LE_HBa_079_P03-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
741 trimmed for vector and quality, 916 raw
Genbank Accession
Sequence
>LE_HBa0079P03_T7_20309 (raw untrimmed)
CTCAAACTGGTACCGGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGCTTTATCCAGTTAATGACATTCCTAATTTGCTATCTCTAGCAGGTA
ACCTTGGTTGTCAGGTGGGAGCTCTTCCTCCAGTTTATTTGGGGATGCCATTGGGGGCTAAAAATTATTTTTGTAGAAATTTGGAATGATGTTGTAGGAA
GGTGTGACAAAATTGTCAAGGTGGAAATCTCAATATCTTCCCTAGGTGGGAGATTGACTCTCATTAATTCAGTTTTAGATGCTCTTCCTACGTACATAAT
GTTTATCTTTCCATTATCCGAAGAGGTCAAAAAAAGAATTGACTGATTAAGAAGAGATTTTCTTTGGCAAGGCAGCAAAATAGAAGAAAAAGCAGTAATC
AAAAGGGTTTGAGTGACTTCTTGAAAAAGTGAAAAAAGCTCCCAGACACAAAAATTGAGGAATGTCCTAACCAGGAGGGTAACTGGCTTATTTCTCCCCC
CCCCCTTTGCAATCGATGGAAGACATTATTTATTTTGCAGTTGGATTCAAAGCCTACGACATCTCAAGAACACTTGGCACGATAAGAGCTTGGTATGATT
GGACTGAGAGGAATAGGAAATTCGTTACGAGAACAACTTTCAATGAGAAGACAAGGGAATGGATCGTGCAAACATGGCGGGAGGCATCCCTACAAAGGGG
GAACATGGTGAAGAGATGGAAGAAGAAAGACAGTTTCTCAGAAGTTTTTTGCTCTAGGAACTACAATAAATACGGTAGCTACATCACTCTAATTAATGTG
AAAGGCAAGAGGAGGGGAGTATTTATCATACCTGAACTAGCATTCAATTTCGGGTTGTTGAGCATTGCAGAAAAGGTGGGGAAATTCATTATTAGTCACA
AAAAGTCATGAACTTG
>LE_HBa0079P03_T7_20309 (trimmed for quality and cloning vector)
AGCTTGCTTTATCCAGTTAATGACATTCCTAATTTGCTATCTCTAGCAGGTAACCTTGGTTGTCAGGTGGGAGCTCTTCCTCCAGTTTATTTGGGGATGC
CATTGGGGGCTAAAAATTATTTTTGTAGAAATTTGGAATGATGTTGTAGGAAGGTGTGACAAAATTGTCAAGGTGGAAATCTCAATATCTTCCCTAGGTG
GGAGATTGACTCTCATTAATTCAGTTTTAGATGCTCTTCCTACGTACATAATGTTTATCTTTCCATTATCCGAAGAGGTCAAAAAAAGAATTGACTGATT
AAGAAGAGATTTTCTTTGGCAAGGCAGCAAAATAGAAGAAAAAGCAGTAATCAAAAGGGTTTGAGTGACTTCTTGAAAAAGTGAAAAAAGCTCCCAGACA
CAAAAATTGAGGAATGTCCTAACCAGGAGGGTAACTGGCTTATTTCTCCCCCCCCCCTTTGCAATCGATGGAAGACATTATTTATTTTGCAGTTGGATTC
AAAGCCTACGACATCTCAAGAACACTTGGCACGATAAGAGCTTGGTATGATTGGACTGAGAGGAATAGGAAATTCGTTACGAGAACAACTTTCAATGAGA
AGACAAGGGAATGGATCGTGCAAACATGGCGGGAGGCATCCCTACAAAGGGGGAACATGGTGAAGAGATGGAAGAAGAAAGACAGTTTCTCAGAAGTTTT
TTGCTCTAGGAACTACAATAAATACGGTAGCTACATCACTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.964365
Expected error %
0.49485
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT40556.1| Score 55 E Value 3e-12 Identity 39.10% Align. Length 330bp (44.53%) Frame 2
hypothetical protein PGEC542.21 [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0079P03
Clone
Clone name
hba-79p3
LE_HBa0079P03
P079P03
Clone type
BAC
Contamination
none
Estimated length
73,017
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found