Clone Read LE_HBa0080G24_T7_20687

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080G24_T7_20687
Primer
T7
ID from Seq. Facility
LE_HBa_080_G24-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
624 trimmed for vector and quality, 803 raw
Genbank Accession
DU037699
Sequence
>LE_HBa0080G24_T7_20687 (raw untrimmed)
TCTTCGTCTATGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCAAAAAAGAACTATAGCTTTCCAATAGAAGCAAATAGTGAAACTATGATT
ACCAAGATAGCCTTCTAATAAGTATTTTGAGAACTAATCTCAAAAGCACAGATTTTGTATGTTTTTAAACTTAAGAGTCAACATATTTTTGGAGTAGTTT
TGAGCAGTGATATGGGGGAGAGTTCATATAACTCACAACCCCCATAAATCATGTAGCAACCATAGGTACAAAAGGTTTATACTTTTTAAATGAACCCCTT
TCACAGTAGACTAGTGGATCCATTAGGCAGTTCAAGTCGTAGACTTTTTGTAGGGTATATGATGTGTTGCAGTGTGATGTTAGATCGATGTATCGATACT
GTATTTCTTAAGTGATGGTGGTCGGTTAGCGAAACTCCCACTTAAGTTATTGTATTCTAATATACATCATTTACTTGAATTATTATAAACATGTCAGAGT
TAATTGTATCTTGCATACATTCATAGGTTATCAGCATGTTCTAGAAAGTTTTCTTTATATTGCCCTTACTTTGAAATTGTATTATGTGGAATGAGTGATG
TTGTTCATGAGTTGAGAAGAGCAAACGTAATTGTTCCTTCTTACTCTGTTTGAAGATCAGGTGTTGTTTGCATTCCAACTCTCATACTCCGTACTTTCAA
TGTATTGATATTAGTTGGCCTGCATCAAATTATGAATGCATTCACCCGGTTTTTTTAGATTATTTTTTCAGCCCACCCTTTGATTCCACCTAGTAAGTTA
AAA
>LE_HBa0080G24_T7_20687 (trimmed for quality and cloning vector)
AGCTTTCAAAAAAGAACTATAGCTTTCCAATAGAAGCAAATAGTGAAACTATGATTACCAAGATAGCCTTCTAATAAGTATTTTGAGAACTAATCTCAAA
AGCACAGATTTTGTATGTTTTTAAACTTAAGAGTCAACATATTTTTGGAGTAGTTTTGAGCAGTGATATGGGGGAGAGTTCATATAACTCACAACCCCCA
TAAATCATGTAGCAACCATAGGTACAAAAGGTTTATACTTTTTAAATGAACCCCTTTCACAGTAGACTAGTGGATCCATTAGGCAGTTCAAGTCGTAGAC
TTTTTGTAGGGTATATGATGTGTTGCAGTGTGATGTTAGATCGATGTATCGATACTGTATTTCTTAAGTGATGGTGGTCGGTTAGCGAAACTCCCACTTA
AGTTATTGTATTCTAATATACATCATTTACTTGAATTATTATAAACATGTCAGAGTTAATTGTATCTTGCATACATTCATAGGTTATCAGCATGTTCTAG
AAAGTTTTCTTTATATTGCCCTTACTTTGAAATTGTATTATGTGGAATGAGTGATGTTGTTCATGAGTTGAGAAGAGCAAACGTAATTGTTCCTTCTTAC
TCTGTTTGAAGATCAGGTGTTGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.938892
Expected error %
0.456121
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080G24
Clone
Clone name
hba-80g24
LE_HBa0080G24
C01HBa0080G24
P080G24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found