Clone Read LE_HBa0080I05_T7_20745

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0080I05_T7_20745
Primer
T7
ID from Seq. Facility
LE_HBa_080_I05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
807 trimmed for vector and quality, 851 raw
Genbank Accession
Sequence
>LE_HBa0080I05_T7_20745 (raw untrimmed)
GCGGGGTCCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAAAACATATAAACAAACTTGCCTTTGCAACTAAAAATTCATTAGATTAATC
CATAACTACTAAACCAAATCACAGTCAAACTACAATAATATATTAGCTAGCAAGACCCAACATCAATCATAACTCATAATCACAAAATCACACCCCAAGA
ATATGGATTTTAGCTAGACATAAACAAGAGGTAGAAATTTACAACAAAGTGAGCTTGCATTCAAGGGGGTATGAATATCTTAGTCTTTTACAGCCCAAGG
AGGAAGAAATCACAAGGCCAAAGTCCAAATTCTTAGAGTTGAAACCCTTTTGGTCTTCATGTTCTTCTTTCAAAACCCTCTAAAACACAATAGCTCAAAA
ACTTACAAAAAGTACTGGAAAATATGATAATTACCTGTTTGAATAATAACAGTTCAATATGTAAGTTAAAACAGTCCACAAGTCTTTATAGTTGTCACAG
AATAGTGCTACGTAAGGCTGCATTCGTCAGAATCATCGAAAAAATTAGCAATCCGCCCATTGATTACATTATCACCACTTTACGTACTGTCCAAGCATCT
CCGTGTTTTGGATTAATTCACGATAAGGCACTATTTCGCAAAACATCTCAGAGATGCGCTAAATTCTCCTTTTTTACTTCCAATTTAATCCTTTCTTTTA
AAGCTTAGCACACTGGAAAAAAGGAAAAACTTAAAACCTATCCACCAAGTTGCCAAGTTGAACTTCCTTTATGCTCAGGCCTTTTATTTTCCTTTGTACT
TTTTCCCCCTTTTTCCCCGGGTAACGTCCCTTTTTTTTTTTTTTTTTTTTT
>LE_HBa0080I05_T7_20745 (trimmed for quality and cloning vector)
AGCTTAAAACATATAAACAAACTTGCCTTTGCAACTAAAAATTCATTAGATTAATCCATAACTACTAAACCAAATCACAGTCAAACTACAATAATATATT
AGCTAGCAAGACCCAACATCAATCATAACTCATAATCACAAAATCACACCCCAAGAATATGGATTTTAGCTAGACATAAACAAGAGGTAGAAATTTACAA
CAAAGTGAGCTTGCATTCAAGGGGGTATGAATATCTTAGTCTTTTACAGCCCAAGGAGGAAGAAATCACAAGGCCAAAGTCCAAATTCTTAGAGTTGAAA
CCCTTTTGGTCTTCATGTTCTTCTTTCAAAACCCTCTAAAACACAATAGCTCAAAAACTTACAAAAAGTACTGGAAAATATGATAATTACCTGTTTGAAT
AATAACAGTTCAATATGTAAGTTAAAACAGTCCACAAGTCTTTATAGTTGTCACAGAATAGTGCTACGTAAGGCTGCATTCGTCAGAATCATCGAAAAAA
TTAGCAATCCGCCCATTGATTACATTATCACCACTTTACGTACTGTCCAAGCATCTCCGTGTTTTGGATTAATTCACGATAAGGCACTATTTCGCAAAAC
ATCTCAGAGATGCGCTAAATTCTCCTTTTTTACTTCCAATTTAATCCTTTCTTTTAAAGCTTAGCACACTGGAAAAAAGGAAAAACTTAAAACCTATCCA
CCAAGTTGCCAAGTTGAACTTCCTTTATGCTCAGGCCTTTTATTTTCCTTTGTACTTTTTCCCCCTTTTTCCCCGGGTAACGTCCCTTTTTTTTTTTTTT
TTTTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.942655
Expected error %
1.83318
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0080I05
Clone
Clone name
hba-80i5
LE_HBa0080I05
P080I05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found