Clone Read LE_HBa0005L19_T7_2101

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0005L19_T7_2101
Primer
T7
ID from Seq. Facility
LE_HBa_005_L19-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
792 trimmed for vector and quality, 900 raw
Genbank Accession
DU022347
Sequence
>LE_HBa0005L19_T7_2101 (raw untrimmed)
TCGGGTCCCGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAAGTCGAAGCTGAGACGAGCGAGCCATTAGAGGACGGAGCGAGGGGGTCCCTA
TTTCAAACCCTTTTATTATTAATAAGAGTTTATCTGTATTTGAACTCTTCTATTTTTCTTTTTCACCACCGATGAGGGACAAATGCCTTTTTGTTATAGC
ATAAGAGGACCTTTCAAATTCCTAACTCTTCAAGTTCTCAACATTTCAAATTCCTCTCTTTCCCTCTATTTCCCATCAATTCTTGCTACATACCCAACAA
TCCACCTCATTGATGGGGAATGGTTATAACATAGGAATTGTTTACTTTACAGGCCAAAATTAATTGCATCTGGATAAGTAGGTTTTCCCTTAGACTTTCC
GTAGTCAACATATGTCGGATATACTCGATCAATCAGTAGATGTAATATCTTTGAACCGTTGAGCTTTAATGTATACCTAGACAACCATATGTCACACAAT
TAACCCTTTACTATTTATGGTTCTTACTGTTGTGTTGGTTTCATCCATGAAAACCTCCTGGTTTCATGAGTGTATAGAGAATAGGCTTTTGACATAAAAT
TCTCTTCGAAGCGGCTTCCACTTCACACTCACATAAGTAATTGCTAGCCGTGTCATCTAGTAGAAGCACTATTTGGTCAAATGTACCAAACATAGAAAAT
CATTTAAAACTTTAAGTTTTATTATGTCATTAACAAGCCTTAAAGTCTTTACCTTGCTCCTGAACATTGTCTTCATCATGAGAATGGATTAAGTTAATTG
ACAAAGTCGAACCAACAACCACAACTTTGTTTTTCTCCATGAATTCTAGTTCTTGGGATCCTTTATTCGGCTAGAAAAAAATTTACCCTTCCTGGCTGAA
>LE_HBa0005L19_T7_2101 (trimmed for quality and cloning vector)
AGCTTAAGTCGAAGCTGAGACGAGCGAGCCATTAGAGGACGGAGCGAGGGGGTCCCTATTTCAAACCCTTTTATTATTAATAAGAGTTTATCTGTATTTG
AACTCTTCTATTTTTCTTTTTCACCACCGATGAGGGACAAATGCCTTTTTGTTATAGCATAAGAGGACCTTTCAAATTCCTAACTCTTCAAGTTCTCAAC
ATTTCAAATTCCTCTCTTTCCCTCTATTTCCCATCAATTCTTGCTACATACCCAACAATCCACCTCATTGATGGGGAATGGTTATAACATAGGAATTGTT
TACTTTACAGGCCAAAATTAATTGCATCTGGATAAGTAGGTTTTCCCTTAGACTTTCCGTAGTCAACATATGTCGGATATACTCGATCAATCAGTAGATG
TAATATCTTTGAACCGTTGAGCTTTAATGTATACCTAGACAACCATATGTCACACAATTAACCCTTTACTATTTATGGTTCTTACTGTTGTGTTGGTTTC
ATCCATGAAAACCTCCTGGTTTCATGAGTGTATAGAGAATAGGCTTTTGACATAAAATTCTCTTCGAAGCGGCTTCCACTTCACACTCACATAAGTAATT
GCTAGCCGTGTCATCTAGTAGAAGCACTATTTGGTCAAATGTACCAAACATAGAAAATCATTTAAAACTTTAAGTTTTATTATGTCATTAACAAGCCTTA
AAGTCTTTACCTTGCTCCTGAACATTGTCTTCATCATGAGAATGGATTAAGTTAATTGACAAAGTCGAACCAACAACCACAACTTTGTTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.961782
Expected error %
0.598389
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38766.1| Score 71 E Value 4e-11 Identity 28.20% Align. Length 116bp (14.65%) Frame 3
putative polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0005L19
Clone
Clone name
hba-5l19
LE_HBa0005L19
C01HBa0005L19
P005L19
Clone type
BAC
Contamination
none
Estimated length
105,896
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found