Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0086B15_SP6_23500

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0086B15_SP6_23500
Primer
SP6
ID from Seq. Facility
LE_HBa_086_B15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
720 trimmed for vector and quality, 925 raw
Genbank Accession
Sequence
>LE_HBa0086B15_SP6_23500 (raw untrimmed)
AAAAAAAAATGTCTTCTCTAAGATATGTANCCTCAACCTTCCATAAGAGATCTGAGACTACCTTCGAGATACTAACACGCGATCTCGTTTAAGGGGTGAN
NNNNAAGNTAANNTTATTAGAATAACCCTAGAATAGTAAGAATGATAAATTGAGAATATATATATATATGCATATATATATATATATATATATATATATA
TCCAATCTAGTAGTTTAATACAAAAGAAATATCAAACTTAAATGCTAAGATGACTCTACACTATGTATGAAATAATCCTCTAAACTGACTAGAAGTGTTT
GGAAATGTCCTACCTAACTCTAGCGAAAATTGAAACTAAAAGACGATAATACGAAAATGATAACATGAATATTGTCTTTGGAGAATGAGACACATAAGTT
ATATCTACTAAGTTGGATATTGGGAATCGAAATATGTGTGACCTAGATACTGAGAACCTTACTTCATCATTAAAAGATGTAGCAAAGAGTATGCATCATT
ACTTGAAAGGTACTAAGCATACATGATATAGTTAAGCTAAAATGATAAATAACTGAACAAGCGATAAAGAAAATATATTATTTCTAATGCTGATATAGAT
ACATAATTGTCACGACCCAAAACCGGGCCGCGACTGGCTCCCACACTTACCCTCCTATGTGAGCGAACTAACCAATCTAAACCTTAACATTTCAATGTAA
ATCATCATAAAATAATGCGGAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATTATTTTCCAAAATCTGGAAGTCATCATCAGAAGAACATCT
ATGATCAAGTTACTAAATCTAAGAGTTTTTAAGAATATAAAATATATAAAAAGTTATTTATGCGGGAATTGAAGGAATCAAGATTGAAGAGAAGATTCAG
TCAAGTTAATAATTAGCTTACCTTA
>LE_HBa0086B15_SP6_23500 (trimmed for quality and cloning vector)
TAAGAGATCTGAGACTACCTTCGAGATACTAACACGCGATCTCGTTTAAGGGGTGANNNNNAAGNTAANNTTATTAGAATAACCCTAGAATAGTAAGAAT
GATAAATTGAGAATATATATATATATGCATATATATATATATATATATATATATATATCCAATCTAGTAGTTTAATACAAAAGAAATATCAAACTTAAAT
GCTAAGATGACTCTACACTATGTATGAAATAATCCTCTAAACTGACTAGAAGTGTTTGGAAATGTCCTACCTAACTCTAGCGAAAATTGAAACTAAAAGA
CGATAATACGAAAATGATAACATGAATATTGTCTTTGGAGAATGAGACACATAAGTTATATCTACTAAGTTGGATATTGGGAATCGAAATATGTGTGACC
TAGATACTGAGAACCTTACTTCATCATTAAAAGATGTAGCAAAGAGTATGCATCATTACTTGAAAGGTACTAAGCATACATGATATAGTTAAGCTAAAAT
GATAAATAACTGAACAAGCGATAAAGAAAATATATTATTTCTAATGCTGATATAGATACATAATTGTCACGACCCAAAACCGGGCCGCGACTGGCTCCCA
CACTTACCCTCCTATGTGAGCGAACTAACCAATCTAAACCTTAACATTTCAATGTAAATCATCATAAAATAATGCGGAAGACTTAAACTCATTAATAAAA
ACCAATTCAATAACTATTAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938033
Expected error %
2.13219
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0086B15
Clone
Clone name
hba-86b15
LE_HBa0086B15
P086B15
Clone type
BAC
Contamination
none
Estimated length
91,633
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found