Clone Read SL_EcoRI0058J06_T7_249561

Sequence Read 
Read Class
BAC ends
Read ID
SL_EcoRI0058J06_T7_249561
Primer
T7
ID from Seq. Facility
SL_EcoRI_058_J06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
563 trimmed for vector and quality, 867 raw
Genbank Accession
CZ953892
Sequence
>SL_EcoRI0058J06_T7_249561 (raw untrimmed)
AGTCAGGAACAGCTGAAGCTTGAAAGAGAAGAAGTTTTACTGAAATGCTTAGCCTTTTTGGGAATGAATCTGGAAATTGTAGAGAACATGCTTATTTACA
CCTTCATGTTTTACTAAAACCTTTCGTATTATGTCGTTTTGTGATCCGCAACTTTAATGGTGTCGTTAAGTTTAAACATTCCGTGGATGTAGTTGAATCA
AAGATACGATCGATGTGATCTTGTGTTTGGAGGTTACAAGTGTTTGTGCATTTGGTTTTGGCTTGTTGTTTATGTTATGTGCAAGATCTGTACCAGGATG
GNNCTGTATGTTTTTCTTCTCTTTTTGATAATGGTGTAACGGTCGACATGGCCGCATTTCAAGTATTTCACGGGATACCTGCTATCTCAACTGGTATCAT
ATTTCACTTGATAACCCCACATTCTCTCAGAGCTATGGGAAAATTTCATGCATAGCCATTCATAAATAGCCTAATTACTCTTCATTACTATAGTTTGATC
ATTACAATTCATAGCTACATGTTATAGGGAGGAGAGAGATTAGGAGATAAAAGAGGGAGGGGAGGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTCTTTTA
GCTTTNNNCACAACTTTTTTCTCTATTTATCTTCTTTCTTAATATTATATTTTCCACTACTTTTTCTTTTTTTTCCCCTTTCATGACATATTAATATTAT
TAACTCTTCTCCAATTTCTGACTTTCAGCTTTATTATATAGCAATTTTCTTATCATCTCATCTTCCGTATCTTTTATACTCTCTTTTATATATATTTCAT
GCTTTAATTCCATTCTTACATACTAATTTTTCCTTGTACTATAATATCCTCAGTTATTTTCTTTTCT
>SL_EcoRI0058J06_T7_249561 (trimmed for quality and cloning vector)
AACAGCTGAAGCTTGAAAGAGAAGAAGTTTTACTGAAATGCTTAGCCTTTTTGGGAATGAATCTGGAAATTGTAGAGAACATGCTTATTTACACCTTCAT
GTTTTACTAAAACCTTTCGTATTATGTCGTTTTGTGATCCGCAACTTTAATGGTGTCGTTAAGTTTAAACATTCCGTGGATGTAGTTGAATCAAAGATAC
GATCGATGTGATCTTGTGTTTGGAGGTTACAAGTGTTTGTGCATTTGGTTTTGGCTTGTTGTTTATGTTATGTGCAAGATCTGTACCAGGATGGNNCTGT
ATGTTTTTCTTCTCTTTTTGATAATGGTGTAACGGTCGACATGGCCGCATTTCAAGTATTTCACGGGATACCTGCTATCTCAACTGGTATCATATTTCAC
TTGATAACCCCACATTCTCTCAGAGCTATGGGAAAATTTCATGCATAGCCATTCATAAATAGCCTAATTACTCTTCATTACTATAGTTTGATCATTACAA
TTCATAGCTACATGTTATAGGGAGGAGAGAGATTAGGAGATAAAAGAGGGAGGGGAGGGGGGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966141
Expected error %
0.895888
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone SL_EcoRI0058J06
Clone
Clone name
sle-58j6
SL_EcoRI0058J06
C01SLe0058J06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato EcoRI BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pIndigoBAC-5
Accession
Heinz 1706
Restriction enzyme
EcoRI

Other Reads:
1 sequencing reads found