Clone Read LE_HBa0089D15_SP6_25132

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0089D15_SP6_25132
Primer
SP6
ID from Seq. Facility
LE_HBa_089_D15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
696 trimmed for vector and quality, 924 raw
Genbank Accession
Sequence
>LE_HBa0089D15_SP6_25132 (raw untrimmed)
CCCGGCTTTGGATATAGGATCTTTCAGCAAGTTGAAGTATGTCTTCATTTTAATTGAGTGTATAGATGTCTTCGCGTTTCTTTTATTGAAGTATTGTAAT
AAGATTAGTATTACTATATTCTTATTGTATGGGCCGTGTCCCAAGTAATCTTGTGTCGAGGATTTGATGAAATGATACTTAGTATATCCTATGATCTTTA
TATGAAACTTATTTTTAAAGACTATTCGAATGTTGTGAAAAGTTTTAATTCCGCAGTACTTTTCATATGTATATATGCGATGAATGATATGAAGGCCTTG
TAAAAGACCTCCGAGATTTCAAGTACGCCTTGTTACGACTCAAGAGTTCCATAGCTTCTAGGGTGTGCTCTCCGGTCGTGACACTACTCCCTAGCAATGT
TGAGAAGCCTCTTTTTCAAAATGTTGTAGAAAACATTGTTGGTAAGTGCCTAGTTGGCACGGGTAATTGCTATGATTGTGGAAAGAGTGGTCATATAAAG
AGACATTTCCCTATAATGAAGATTAAAGGAAGGGAAAATGTTCAAGCACAGTCAATTTCCCGAATCTGGATGCTCCTAAAAAGAATTTATTTTATGCTCT
CAAATCTCATGGTGATCAAGAGATCTCACTGGATATGGTTACCGTTTTGTTACAATTATTTTCCTTTGATGTATGTTTTTCCGTGTCCCAAAGCTACATT
GTCATTTGTGACCCCTCTTGTAGACATGAAATTTGAAATACTACCCGACATATTAGAAGAACCTTCGGTTACTACCATGGTGGGTGATTCTGTGGTTGTT
TAAGAAATCTATAAAGGTGGCCTATTTTTCTACGGAATTGTAACCTTCCCAAAAATTGACTTACCGAATGAAAAACCCATAAGTTTTTAGAAATAGTAAG
GGGGTAATAAGGACTCCCAATCCC
>LE_HBa0089D15_SP6_25132 (trimmed for quality and cloning vector)
TTTCAGCAAGTTGAAGTATGTCTTCATTTTAATTGAGTGTATAGATGTCTTCGCGTTTCTTTTATTGAAGTATTGTAATAAGATTAGTATTACTATATTC
TTATTGTATGGGCCGTGTCCCAAGTAATCTTGTGTCGAGGATTTGATGAAATGATACTTAGTATATCCTATGATCTTTATATGAAACTTATTTTTAAAGA
CTATTCGAATGTTGTGAAAAGTTTTAATTCCGCAGTACTTTTCATATGTATATATGCGATGAATGATATGAAGGCCTTGTAAAAGACCTCCGAGATTTCA
AGTACGCCTTGTTACGACTCAAGAGTTCCATAGCTTCTAGGGTGTGCTCTCCGGTCGTGACACTACTCCCTAGCAATGTTGAGAAGCCTCTTTTTCAAAA
TGTTGTAGAAAACATTGTTGGTAAGTGCCTAGTTGGCACGGGTAATTGCTATGATTGTGGAAAGAGTGGTCATATAAAGAGACATTTCCCTATAATGAAG
ATTAAAGGAAGGGAAAATGTTCAAGCACAGTCAATTTCCCGAATCTGGATGCTCCTAAAAAGAATTTATTTTATGCTCTCAAATCTCATGGTGATCAAGA
GATCTCACTGGATATGGTTACCGTTTTGTTACAATTATTTTCCTTTGATGTATGTTTTTCCGTGTCCCAAAGCTACATTGTCATTTGTGACCCCTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953856
Expected error %
0.215662
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0089D15
Clone
Clone name
hba-89d15
LE_HBa0089D15
P089D15
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found