Clone Read LE_HBa0089I06_SP6_25354

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0089I06_SP6_25354
Primer
SP6
ID from Seq. Facility
LE_HBa_089_I06-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
731 trimmed for vector and quality, 921 raw
Genbank Accession
Sequence
>LE_HBa0089I06_SP6_25354 (raw untrimmed)
GCGAGCTATAGGTTTCGTCTTCTACTTCTATGGGATGAAGTTCCAAGTTTTAGTTTGGGGAATCTCACAAATATCGCGCGGGAGAAGAACAATGAGGAAC
AAAACAAGAAGCAAAAGAAAGGTAAAAAACGAGTTAAAGAGGTTAAAACAATGAAGAAATTGAAAAAAATATGTGTTACTTTGGCATCTACATCGAAGAA
ACTCGTTGACAGTGATGATGATTTTGAGGATTTACCTCCTCAATTTCAGTCAAAAAGTTTTAAAAATAAAGATGGATTAGAGAAGAAAAAGCCAGTGAAT
CATGGAAAAACACGAAATCGTTTACTCAAAAGTGTCATTCTACCAGAGAGTAGATATCCGGTATGTGCTAGTACTTCTTAGTTATTTGTTGTTTAGCAAC
GGTTGTATGTATTGCTGCTTGTTTTTTAGATTAGTATGTGAAATTCATCTTTTATTCAACTAATTACTACCTTTCTTCGACACATAGTATGTGAAATTCA
TCTTCATTCATCTTTAGTATGTAGTAACACATTTTTAATTCATGTTTAATGCATATGCAGGATCGTAAATTCTGAAAACATCCTGATGTTGTGTATATTT
CGAGTAGGTGGTCATGTTACACTAATCATAGTGTAATTGAACAAATCAAACTATCTTTATCTGATAAACAACTTGAGTTGTTTAGGAATACATGTTTTGG
GTACTTTCTTGACCTTCCAAAATCGAGCACACAACTACAACTTATTCATTGTCTTATAAATAGAGAGTTAAACACACACCGGATGATGTGTTTGCTATTG
AAAAAATAACAAAAAGTTATTTTTTGGTCTTAGAGATTTGGGGAATGTACGGGCTTAAATTGTGTTAGTGAAGCCCCTTCATCAAGTTCCCAATCCTGAT
TTTCTTGGAGGATTAGTATTT
>LE_HBa0089I06_SP6_25354 (trimmed for quality and cloning vector)
CGTCTTCTACTTCTATGGGATGAAGTTCCAAGTTTTAGTTTGGGGAATCTCACAAATATCGCGCGGGAGAAGAACAATGAGGAACAAAACAAGAAGCAAA
AGAAAGGTAAAAAACGAGTTAAAGAGGTTAAAACAATGAAGAAATTGAAAAAAATATGTGTTACTTTGGCATCTACATCGAAGAAACTCGTTGACAGTGA
TGATGATTTTGAGGATTTACCTCCTCAATTTCAGTCAAAAAGTTTTAAAAATAAAGATGGATTAGAGAAGAAAAAGCCAGTGAATCATGGAAAAACACGA
AATCGTTTACTCAAAAGTGTCATTCTACCAGAGAGTAGATATCCGGTATGTGCTAGTACTTCTTAGTTATTTGTTGTTTAGCAACGGTTGTATGTATTGC
TGCTTGTTTTTTAGATTAGTATGTGAAATTCATCTTTTATTCAACTAATTACTACCTTTCTTCGACACATAGTATGTGAAATTCATCTTCATTCATCTTT
AGTATGTAGTAACACATTTTTAATTCATGTTTAATGCATATGCAGGATCGTAAATTCTGAAAACATCCTGATGTTGTGTATATTTCGAGTAGGTGGTCAT
GTTACACTAATCATAGTGTAATTGAACAAATCAAACTATCTTTATCTGATAAACAACTTGAGTTGTTTAGGAATACATGTTTTGGGTACTTTCTTGACCT
TCCAAAATCGAGCACACAACTACAACTTATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94474
Expected error %
0.323884
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0089I06
Clone
Clone name
hba-89i6
LE_HBa0089I06
P089I06
Clone type
BAC
Contamination
none
Estimated length
38,846
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found