Clone Read LE_HBa0165G16_T7_255721

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165G16_T7_255721
Primer
T7
ID from Seq. Facility
LE_HBa_165_G16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 965 raw
Sequence
>LE_HBa0165G16_T7_255721 (raw untrimmed)
TACTGTCGGGGTCTCTGAGTCGACCTGCAGGCATGCAAGCTTTCCCTTCTTACCAGTATCATAATACCCTTTATGGGTGAAACTTTCAAGTAGATCCAGT
CATCTACTTCGAATTCTAGCTCCCTTCTCCTAACATAGTGTAGAATCATGCATGTTACCTGGAGACCTTGGCAAACCTTTGATGAAATACATATTAATCA
TCTCCCACTTCCATATGGGAAATTTTGTATTCTGAGTGAATCATTGTTCCTTTGATGTTCTACTTTAACTTGTTGGAAATTCGAATGCTTAGCGAAAAAT
TCTGCAATGCCCTTCTTCATACTACTCCACCAATAAACTTCTCTCAAATCGCGATACATTTTTGTGGAACCTAAATGAATGAAATATCTAGAGATATGAG
CTTTCTCCATGATCCTCCCTTGGAGTTCATCCGCCTTTGATACACACAATCTACCTTGATACCTCAATGCACCATACCCCTTGTTCAAAAGCCAATACTT
TTTGCTTATGAACATTTTCCTTCAATTTAAGAAAAATAAGATCTTGATTTCACTTCTCTTTTACGTCTGGCACTAATGATGATTCAACCCCATTCATAAC
CACCACTCTCCGTTTTGTAAAATCCATTAGTTGGACTCCCAGACGTGCCAGTCTATGCACATCTTTTGCTAACTCTCTCGTTTCTTCCTCCCCATGGGCA
GTACTACCCATTAACCACCCTACTTTTGAACATCACAACCTTATTTAGCCCTTACCTAATTGATAAAGAATACTTCGGTTCTAATTCTTTGAAATAATTT
AGCCCCCCCCTCTCGTATAAAACTAAACTCTCTTTTGAAGGGAACTTATGTTGAAAACTCTTTGGATTCCCTAAATCCTTCCCCTTGAAAACTCATTAAA
TGTATGCAACCCCTTTTTTCCTTATTATATTTTCACACACTCATTTCTAATCCATGGGTCTGGTG
>LE_HBa0165G16_T7_255721 (trimmed for quality and cloning vector)
CTGCAGGCATGCAAGCTTTCCCTTCTTACCAGTATCATAATACCCTTTATGGGTGAAACTTTCAAGTAGATCCAGTCATCTACTTCGAATTCTAGCTCCC
TTCTCCTAACATAGTGTAGAATCATGCATGTTACCTGGAGACCTTGGCAAACCTTTGATGAAATACATATTAATCATCTCCCACTTCCATATGGGAAATT
TTGTATTCTGAGTGAATCATTGTTCCTTTGATGTTCTACTTTAACTTGTTGGAAATTCGAATGCTTAGCGAAAAATTCTGCAATGCCCTTCTTCATACTA
CTCCACCAATAAACTTCTCTCAAATCGCGATACATTTTTGTGGAACCTAAATGAATGAAATATCTAGAGATATGAGCTTTCTCCATGATCCTCCCTTGGA
GTTCATCCGCCTTTGATACACACAATCTACCTTGATACCTCAATGCACCATACCCCTTGTTCAAAAGCCAATACTTTTTGCTTATGAACATTTTCCTTCA
ATTTAAGAAAAATAAGATCTTGATTTCACTTCTCTTTTACGTCTGGCACTAATGATGATTCAACCCCATTCATAACCACCACTCTCCGTTTTGTAAAATC
CATTAGTTGGACTCCCAGACGTGCCAGTCTATGCACATCTTTTGCTAACTCTCTCGTTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952777
Expected error %
0.323367
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38792.1| Score 122 E Value 1e-26 Identity 41.90% Align. Length 536bp (81.34%) Frame 2
putative gag-pol polyprotein [Solanum demissum] gb|AAT38791.1| putative gag-pol polyprotein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38790.1| Score 122 E Value 1e-26 Identity 41.90% Align. Length 536bp (81.34%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165G16
Clone
Clone name
hba-165g16
LE_HBa0165G16
P165G16
Clone type
BAC
Contamination
none
Estimated length
115,284
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found