Clone Read LE_HBa0196P19_T7_258853

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196P19_T7_258853
Primer
T7
ID from Seq. Facility
LE_HBa_196_P19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 936 raw
Sequence
>LE_HBa0196P19_T7_258853 (raw untrimmed)
GACTACTGCACGCATGCAAGCTTGAGTTACTTGGTAAAATCACCTGAGTTTCCTGCCACGAACTAGACTCAAGACATGTATCCCTCTCTCTCCATGCATG
ATCAATGGGAGAGATGCAATGCTATTGTTCTAGGATGGATTATGAATATTGTGTCTACTACTCTAGTTAGCACTATGATTACTAGATCTGATGCACAACT
GCT
TGGAGGATCTTCGAGAAAGGTTTGATAAGGTACATTCATCAAGGGCATTCTAGCTTCACAAGGAGACTGTTACATTGTATCAGGGAACTTCATCTGG
ATAGAATTATTTGTCTCGGCATCTATAGATTTGTGATGAATTTGAAACTCTTATACCACCTTCCATCAGTGCCTGTACCTAATCAAAACAATATGCTTAT
CTTTTACAATTACAAAAATGGTGGCTTGTTCGAAAGGGACTAATTGATGATGATGCTCCCGCTCTGAGTCTAGAGATGCTGCATATTCCTGTACCAAATG
TTAATCAAGTCTATACTGAGACTACAATGCTACCCAGTGAGAGACCGATGGTGTTAGTGCTTATTTCCCCTTCTCATAATCTCTTCTCAAAACTTCGTTT
ATTAACAACATGATGAGCTGCCTTGCCGGTGGATTACCAATCCAGAATGGCTCACGTTAAAGTCCAGCCTAACTTCCTTACTACGAGTACAACCGAAGGG
TAGGATACCTGCCCAGAAATAACGCGGAATCCTCGACAAGAAGCAAAATTCATCTCTTTGCGGGGCGCCTCTTTCTTTTTTTTGGAACAAAAACATGAAG
TTCCCCTTTGAACATACTCCGACTTTCTCATAAAGACAAGGGAGGACTTATTCTCTCCCCCCTTCCAAAGGCCGCCCTTTGGCAGGAATCCCCCTTCCCC
CCCGTGGTATCCCAAAAATACCCGCCCCCCAAATTG
>LE_HBa0196P19_T7_258853 (trimmed for quality and cloning vector)
TGGAGGATC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.563555
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196P19
Clone
Clone name
hba-196p19
LE_HBa0196P19
P196P19
Clone type
BAC
Contamination
none
Estimated length
100,737
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found