Clone Read LE_HBa0195G22_T7_259318

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0195G22_T7_259318
Primer
T7
ID from Seq. Facility
LE_HBa_195_G22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 993 raw
Sequence
>LE_HBa0195G22_T7_259318 (raw untrimmed)
NCTTTATTATTNNNNCCACACGTTCCGGAGGATCCCTCAGTCGACCGCACGCATGTAAGCTNTCTGGATGTACGAAAGGAGAGCCCGCCATAATCCGCGC
TTATATTGCTCATGTCAGAAAGCATGAATGCATACTGTTATCTCTATAATCATGCAGCTTGACAGTTGCCCCTTCGTCAAGCAGTGACACTCCGCTGGAG
ACTTTTTTTCATATCCAGTCACTGCACCTGCGAAACTCTCTATTCCGTACACACAATTGGAACGACTGCCGTGTCTCCAACGTTAATGATACGGCAAAAA
TGCTCTCTTTATGTGGACTGAATTTGAATGAT
TTTTTATACGGTACCACTATTGTCTTCTAATTTGAAACATAATTACCCCCAACAGATTCGACGAGAGA
GAAACGACGTCGCGAATGAGAATTGATAAAGCATCCGCACGTAATTTCTTTTTTATAGTGTTTCACTTGTGGTTTTAATTGGTATTTTCTACTACAACTA
CCGCTGCATATTGGGTTCCAAACTTACTCCTTTGGCGCATTTTCCAGTCCTAACCCTCCTTGAATTTCCAGGGTCGTCTGGGTGGACGCTTCCCATTCAC
CGCCCCAATGCATCACTCAAACCGTCTGCACTCCTCGTGCCACTTTGATACACCTCCCCTCTTGGTCCATCTCCCTCCCCGCCTCTCCTCCCATACTCCA
CCCGCATATCCCATCATCCCCCCCCTCCAATCCCTCTATCTCCCCCCACCCCGCAACTTCCGCCTCCCCAAGCTCCACCCCCACCCCCCACCACCCCATC
CCCGCCGTCACCCAACTCTTCTCTCCCCCCCACGTTAGCCCCTCCCCCTCCCCCCGCTCCCCACCTCCCTCCACACACTCCCCCCCCTCCTCTCCTCACC
CTCCTCCCGACCTCTCTCCTCCACTCCACCCGCCTTCCCGTCCCCCTTATCATTAACAAGAAGTTGGCCCAACCACACCCCCCTCTCCTCCCC
>LE_HBa0195G22_T7_259318 (trimmed for quality and cloning vector)
TTTTTATAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.333289
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0195G22
Clone
Clone name
hba-195g22
LE_HBa0195G22
P195G22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found