Clone Read LE_HBa0140K15_SP6_261082

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0140K15_SP6_261082
Primer
SP6
ID from Seq. Facility
LE_HBa_140_K15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
636 trimmed for vector and quality, 1002 raw
Genbank Accession
Sequence
>LE_HBa0140K15_SP6_261082 (raw untrimmed)
NNAAGATATGAAGACATATCATGGGATAGCTGGAAGTGAATTCTGAAGGACAAACAATACACCTTCAGTACAAGCCATGTTGCCAACAGCTTTTTTGTCT
TCATAGTTCTCCAAAACATTAGTATACTTTGAGAAGCATCAAAATTTAGATTTGTGGAAGGAAGCATCCCTAATTCATATAATTTTTTTGGCAGAAATAG
CAAGTGTTGGTTTTCAGTACATGAATAGACTTTTACTTGAAGGATTATTTATGCAGTTCTGACCTGCTAGTCGATATTTTGCGCAAGTTTCTCATGTGAT
ATGTTTCTTTTTTACTGATTGTTCTGCATACATACTCTCTCCAGGAGTGGGGACGAGGCGGTGAGGGTCTTGATTTATGCTGGTGTGGTGTGGTTTGAAA
TATTGGATGGCTATGTGTTCAAAGTATCATTTGTCATCACTTGCATTGGCCCTTAAGAGGCATTGTGAGTCCTTTGTGGATAGAATTATATGATACTTGT
GCTGGTAGGAGATAGCCTGTACCCCGGAGTGGGAGATTGCGGGCTGTTAAAATAAGTAGAAAAAGTCCAATCATAAATCGTGTTTCTCGATTCCAACTTC
ATTGACTATTAGATCATGCCTTTGTCCATTGAGACTCATTCTTAATATGTATAAAACTTAGCATGTCAAACCATAGAGGAATCATGTTGTCATTTGTGAA
TGTTGTATACAAATAGAGGTACCAAACAGTATATTACTACAATGCCAGAGTCACTAATTTAATTTTTCATTCAACTCCTTTCACCGGCTATCATTAATTC
CCCAAAATAACCTTGGAACAAAGTCCAATTTAACATTATTTGGGCACATTTTTATTGGCCCATTAAAACAACACTTTACCTTTCAAAAAATTTTTCCACA
AAAATGTTAATCCCCCCCCACCAAAAAAAAATTCTCCCAAGTCTTTAAAAAAAATTGCGAAAAAGCTTTGGGGAAACCTAAAAATGGAAATTCAAATCCC
GG
>LE_HBa0140K15_SP6_261082 (trimmed for quality and cloning vector)
AGCTGGAAGTGAATTCTGAAGGACAAACAATACACCTTCAGTACAAGCCATGTTGCCAACAGCTTTTTTGTCTTCATAGTTCTCCAAAACATTAGTATAC
TTTGAGAAGCATCAAAATTTAGATTTGTGGAAGGAAGCATCCCTAATTCATATAATTTTTTTGGCAGAAATAGCAAGTGTTGGTTTTCAGTACATGAATA
GACTTTTACTTGAAGGATTATTTATGCAGTTCTGACCTGCTAGTCGATATTTTGCGCAAGTTTCTCATGTGATATGTTTCTTTTTTACTGATTGTTCTGC
ATACATACTCTCTCCAGGAGTGGGGACGAGGCGGTGAGGGTCTTGATTTATGCTGGTGTGGTGTGGTTTGAAATATTGGATGGCTATGTGTTCAAAGTAT
CATTTGTCATCACTTGCATTGGCCCTTAAGAGGCATTGTGAGTCCTTTGTGGATAGAATTATATGATACTTGTGCTGGTAGGAGATAGCCTGTACCCCGG
AGTGGGAGATTGCGGGCTGTTAAAATAAGTAGAAAAAGTCCAATCATAAATCGTGTTTCTCGATTCCAACTTCATTGACTATTAGATCATGCCTTTGTCC
ATTGAGACTCATTCTTAATATGTATAAAACTTAGCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.960969
Expected error %
0.153993
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0140K15
Clone
Clone name
hba-140k15
LE_HBa0140K15
P140K15
Clone type
BAC
Contamination
none
Estimated length
65,055
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found