Clone Read LE_HBa0165I09_SP6_262669

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165I09_SP6_262669
Primer
SP6
ID from Seq. Facility
LE_HBa_165_I09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
551 trimmed for vector and quality, 1016 raw
Sequence
>LE_HBa0165I09_SP6_262669 (raw untrimmed)
NAAAGCTTATGGTTGTTGTATCATTTTCAAAAATAATCTGGGAGTGACATCTCCTCTTTCTTATATTTCTAATTTTTAATTGTTAATTACCAATTAATTC
AAATGCTAATTAATGGAATAAGCAGTAGTTGAGCTAGGAGATACAAAAGGCCTATTTGTTAATTAGTATTTAGGAGTTACAAAAGTTTTGAAAGTAAACG
GATGTCTTTTCCTATTACGAGTAGAATCTTCGAATTAATAGAATTTTATATATATATATATATATATATATATATATATATATATATATTCTTGGCTTTA
GAGACATGCCACATCAGCGACTTCATGTTTCCGCTTTATATAAGTATAATATATAATGGTTACATCGATTGTAAATGAATTTTAGTTTTTATTGTCATTG
TTAATACCCTAATCTTTAAGAATTCGTTCCAGGGAGGATTTTATGATCTATCAATTAAAATATCTCCTTGTGTGGTGTAACGAAGAACTCTCGAAAAGAT
CCACTGAGACTCCATCCACGGTCACATGGAAATCTCTTCATACTTGTCAAGGACTAGTGAGATCTTTGATCTTCGATTCTGCGTGCTTGAGAGTAGCTTA
AATAAAAAAAAAGTCTGATCTAACTTGAATTTGGCATGCTCGTCAGTCTACTATTATGTCCGAAAATGGGGATGTGTGAAGGGCGTCTCTTACCCCCCAT
AATGGAATTGAAAGGGCCTTTCTACCCATTGTTTGGATTTCTGACCAACTGACATAAATTTTAATGAAAACTGAGTCGGTTCCACCTATTTTCCTATATG
AAAAAAATAATCCCCTCCCTAACCCATAGTTGGTTTAGGAAAACTTGTTGATTTTTCTTTTCCTTCTGTCTGTTACGAAAAAGATATCATCTTCTCTTAT
TAACGTGTTTAGATATTAATAATCAGAATGTGTCGCTTGTCGTATTTCAAAAAATACTTTTTCTCACTATGAGTGATATAATCTGAAGCCCTATAATCTT
TGATATATCTTTGCCC
>LE_HBa0165I09_SP6_262669 (trimmed for quality and cloning vector)
TTTCAAAAATAATCTGGGAGTGACATCTCCTCTTTCTTATATTTCTAATTTTTAATTGTTAATTACCAATTAATTCAAATGCTAATTAATGGAATAAGCA
GTAGTTGAGCTAGGAGATACAAAAGGCCTATTTGTTAATTAGTATTTAGGAGTTACAAAAGTTTTGAAAGTAAACGGATGTCTTTTCCTATTACGAGTAG
AATCTTCGAATTAATAGAATTTTATATATATATATATATATATATATATATATATATATATATATTCTTGGCTTTAGAGACATGCCACATCAGCGACTTC
ATGTTTCCGCTTTATATAAGTATAATATATAATGGTTACATCGATTGTAAATGAATTTTAGTTTTTATTGTCATTGTTAATACCCTAATCTTTAAGAATT
CGTTCCAGGGAGGATTTTATGATCTATCAATTAAAATATCTCCTTGTGTGGTGTAACGAAGAACTCTCGAAAAGATCCACTGAGACTCCATCCACGGTCA
CATGGAAATCTCTTCATACTTGTCAAGGACTAGTGAGATCTTTGATCTTCG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.920825
Expected error %
0.0626606
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165I09
Clone
Clone name
hba-165i9
LE_HBa0165I09
P165I09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found