Clone Read LE_HBa0168K01_SP6_263110

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168K01_SP6_263110
Primer
SP6
ID from Seq. Facility
LE_HBa_168_K01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
163 trimmed for vector and quality, 890 raw
Sequence
>LE_HBa0168K01_SP6_263110 (raw untrimmed)
TTGGACGACAAACATGATCGAACGACACTCATGGTGTTGCATGCCATCACCGCATTTGGACAACACACACTGTCAGACGACGTTGGGCTTGGCATGACAT
CATTGCCTTTGGGCAGCATAGATGGTCGGACGGCATCGAGCGTGGCATGCCATCACCGCCTTTGGACAGCACACACGGTAGAACGACGTCTGTGCGTGGC
ATGCCATCATCGCCTTTGGGCAGCACAAACATTCTACTGACATCAGGCATGGTATTCCATCCTCGCCTATGGGCCGTTCAATCGGTTGGACGGCGTCTGG
TCTGGCATGTCTTTCTCCTCCTTTGTTCTGTCTCATTACTTCTTTACTTCTTTCTGATTTTCACTCTCCTACTTTGTATTTCTTTTTGTTTTGACTTTGC
CTAAACTATCATCTCTGATTTGTGACTACAACTCATATTTTTATTTTATTTTCTCTAATTTAAGATGCTTGATATGTACTATCTACTAAGCATCTTTTTT
ACTTTGCTTGTCTGCTATTCTTTCATTGAGGATCTCTTCTTGCTTACTTCCATCACTTTTCTTGTTTCTTCATCACTTCTCAATTGCTCAGTTATCTCTT
TGATTTACCCTCTCCTCCTTCTGCATCTTCTTTTGGCTTATGTGATATTTATTATTTTTGTCTTCTTTATTACATTTTTTCGACTTATCTGGCTTTATTT
CCTTCTCACTCCTTTTTCTTTCTTTCACTACTACTCTCGTTCCTTTATTCCTTTCGTGGTCATAGTGCTCATATTATCTTCTCTCTCTCTATTTTACTTT
TTTCTTGTGTATCCATCTTTCTTCCTACTATTCATTTTATCTTTCTGTCTTTTCTCCATGATCATTTCACTTATTTATTTATACATTCTC
>LE_HBa0168K01_SP6_263110 (trimmed for quality and cloning vector)
ACGACAAACATGATCGAACGACACTCATGGTGTTGCATGCCATCACCGCATTTGGACAACACACACTGTCAGACGACGTTGGGCTTGGCATGACATCATT
GCCTTTGGGCAGCATAGATGGTCGGACGGCATCGAGCGTGGCATGCCATCACCGCCTTTGGAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.916634
Expected error %
1.42218
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168K01
Clone
Clone name
hba-168k1
LE_HBa0168K01
C04HBa0168K01
P168K01
Clone type
BAC
Contamination
none
Estimated length
87,833
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found