Clone Read LE_HBa0092K09_SP6_26992

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0092K09_SP6_26992
Primer
SP6
ID from Seq. Facility
LE_HBa_092_K09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
762 trimmed for vector and quality, 927 raw
Sequence
>LE_HBa0092K09_SP6_26992 (raw untrimmed)
GCGGGGGCTTATCTATGATTCTAGTATAGAAATCATGGATCATGCATTTGTTGGGTTATGGGCCTTTTTCCCTTCCTATGTGGATAAATAAAAACCTAAT
TTGGACCAACCCATTTTTGCCCATAGGCCCATTCTTATGAGGCAAATATAAGCCTATTTAGGTCTTATTTTCATATACACAGAGAGTTTTTTCAGCAGCC
AAAAAGAGAGAAAGAGAGCAGTTTTCGCAGTCAAAATTCAGCCCTAACAGCCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTATCCGATTGAGCTGAT
TTTTGGAAAACATATTATGTTCATCTCAATATTTGATTAGGAACTAACAGAGTTGGATTTGGTGGCCTGCAACTTCAGTTTTGCTGTCGTGAACAGTAGC
TGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTGTTTTGTGGCCAATTTTGGA
GAAAAATATTGTAACTCTTGGTTATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCATATCGAAGGGTTTTCTACGTAAATTTTGGTGTCTTG
TGTGATTGGTTTATTATTGCCTTGTTATATTTGTTTGGTTAAATTACTTACTGCCTTACTATCATATTGCTTGTGGTTGTTTGTATTCTCTTGGTTCAAA
TCGAGAAGGGAAAGTATAGACTTCGGTATTCTTCCGCTGTTATCCTGTCAGACATTCTTTGTTAGTGTCTTATCTTTCCCAACAAAGTGGTATCAGAGCA
TTGGTTATTGTTGATTTGTCGTTTTGAATGATGGAGGAAAATATGAATAAAAAGGTGTGTTTAAATGGTATAACTGTCATATTTGGAAAGGCAAGATGAA
GATTTTTAATTGGCAAGAAAATCGATT
>LE_HBa0092K09_SP6_26992 (trimmed for quality and cloning vector)
AGAAATCATGGATCATGCATTTGTTGGGTTATGGGCCTTTTTCCCTTCCTATGTGGATAAATAAAAACCTAATTTGGACCAACCCATTTTTGCCCATAGG
CCCATTCTTATGAGGCAAATATAAGCCTATTTAGGTCTTATTTTCATATACACAGAGAGTTTTTTCAGCAGCCAAAAAGAGAGAAAGAGAGCAGTTTTCG
CAGTCAAAATTCAGCCCTAACAGCCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTATCCGATTGAGCTGATTTTTGGAAAACATATTATGTTCATCTC
AATATTTGATTAGGAACTAACAGAGTTGGATTTGGTGGCCTGCAACTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTA
ATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTGTTTTGTGGCCAATTTTGGAGAAAAATATTGTAACTCTTGGTTATTA
TAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCATATCGAAGGGTTTTCTACGTAAATTTTGGTGTCTTGTGTGATTGGTTTATTATTGCCTTGTTA
TATTTGTTTGGTTAAATTACTTACTGCCTTACTATCATATTGCTTGTGGTTGTTTGTATTCTCTTGGTTCAAATCGAGAAGGGAAAGTATAGACTTCGGT
ATTCTTCCGCTGTTATCCTGTCAGACATTCTTTGTTAGTGTCTTATCTTTCCCAACAAAGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.951437
Expected error %
0.0470674
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0092K09
Clone
Clone name
hba-92k9
LE_HBa0092K09
P092K09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found