Clone Read LE_HBa0096D12_SP6_28966

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0096D12_SP6_28966
Primer
SP6
ID from Seq. Facility
LE_HBa_096_D12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
715 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0096D12_SP6_28966 (raw untrimmed)
CCGGGCTATGGGGGTTTGGTTGAAGGTTCTTTCTTGTAGACTAGCTTGCGTATGCATTTAAAGGTATCTGCTCACCCTTTATATGCTCTAGCATGTGAAA
GATAACACGATGAACCCCCCGTCTAGTTTGTTAATGAAAGGAAAACAATAGAATACAAGGAATTTAAATGTGAATATGACTAAGAGAAAAACTTATGTAG
AGAGTTATATTTCTTTGAAAAGAATCAGAGAATGCATAAAACCTACAATTGAAAAACTGAAATAGATCATGGTACTACTTTTAAGTCATGATTCTAACAA
TGGTAATTGTTCAAAATAATTCAAAGAAGATATACAGGAAACAAATATTGCAGTCCTAAAGCAACAAACTGATACTCCTTGCATTAGGAGCTTGAAATTC
CAGGTTGGTCACTCGGGAACTCGAACTTGCTGATAAGAATGGATATCTTAAATACACCTACTAGCGGATCTTCAGATTTGTACTAAAAATGTATCACTTC
TCTTTTTTTCTGCACATCCCTCAAGAAATACAGATTATGTTGAATTGTTTAGTATTTTCATAGAACACTGGATTATGTGAAATGTCTATTGCATCTTGTT
TATCTTCATGACCTCAATCTTGACTTTTTTCTCCATATTCAAATCAGAAAATATTTTTATCACACCCATAAGGTTTGATTTAATGCTGAAGTTGCAGCTA
CGAATGAAGCCCTCTGGTATAGATTTTGCCCCAGTTTCCTGTTGTGTATAACACCCAAGAGAAAACCCCTGATCCCCTGACATAAAGAGTATCTTGATGT
ACTTTTCTTGTCCTTCATGGATCGAGCTCCATTCTCTATGAATCCTATTATGTGAAACTCCCCCACTTCTTGTATTGACTCCATTCTCATTTTATGTTTA
TGGA
>LE_HBa0096D12_SP6_28966 (trimmed for quality and cloning vector)
CTTTCTTGTAGACTAGCTTGCGTATGCATTTAAAGGTATCTGCTCACCCTTTATATGCTCTAGCATGTGAAAGATAACACGATGAACCCCCCGTCTAGTT
TGTTAATGAAAGGAAAACAATAGAATACAAGGAATTTAAATGTGAATATGACTAAGAGAAAAACTTATGTAGAGAGTTATATTTCTTTGAAAAGAATCAG
AGAATGCATAAAACCTACAATTGAAAAACTGAAATAGATCATGGTACTACTTTTAAGTCATGATTCTAACAATGGTAATTGTTCAAAATAATTCAAAGAA
GATATACAGGAAACAAATATTGCAGTCCTAAAGCAACAAACTGATACTCCTTGCATTAGGAGCTTGAAATTCCAGGTTGGTCACTCGGGAACTCGAACTT
GCTGATAAGAATGGATATCTTAAATACACCTACTAGCGGATCTTCAGATTTGTACTAAAAATGTATCACTTCTCTTTTTTTCTGCACATCCCTCAAGAAA
TACAGATTATGTTGAATTGTTTAGTATTTTCATAGAACACTGGATTATGTGAAATGTCTATTGCATCTTGTTTATCTTCATGACCTCAATCTTGACTTTT
TTCTCCATATTCAAATCAGAAAATATTTTTATCACACCCATAAGGTTTGATTTAATGCTGAAGTTGCAGCTACGAATGAAGCCCTCTGGTATAGATTTTG
CCCCAGTTTCCTGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.95032
Expected error %
0.350176
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0096D12
Clone
Clone name
hba-96d12
LE_HBa0096D12
P096D12
Clone type
BAC
Contamination
none
Estimated length
103,675
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found