Clone Read LE_HBa0006N06_T7_2939

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006N06_T7_2939
Primer
T7
ID from Seq. Facility
LE_HBa_006_N06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
308 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0006N06_T7_2939 (raw untrimmed)
GGCCTTAACTGGTACCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTAAATCTATTGTTGTCGATAGCCCTTTCTACTTTTCATTTCCTTTA
TATGGTGTTAATGCTTCACACTCTGATTTAACATTTCAAATCACTAATGCGACTATATTTTAATTTCCATATAAAATTCATTAGGGCGGATGTAGTTAAC
AAGCAACAGGTTCATCCGAATCCATCCAATGATTTTAATAGATTTTATATATATATATATATATATATATATATATATATATATATATATATATATATAT
ATAAATATATATATATATACACATATATATATATATATATATATATATATATATATATATAGACTTCACCACTTCCTATATATGTGACTCCACTAAAATA
AACTTTTTTAGATGCTGGGTGACAAATATATACCAGACACACCCATAAAATAACACCATATCTCTCTCTGATATATACATGGCGTTTCTGGAGAGGTCTC
TATATTCTCAGAATAACACAGAGACATTTTTGCGGATCCCGCGCTCTCTGAGGGAGATGTTTATTCTCTACTATACGTGAACACATAAGATTGTGTTTGA
CATATTTCGCGCCACAATCGGGCGCGAGTGCGGATACTCTGATATATCTAAACCCCCTAGCGTTCTACTCAGGATAGAGAGGGCACTGTGATATTTTGTG
TTTGGAGATCACCTTTTCACACATATATTCACTTTTTCTTATATATGTGTCAAGTTTTGTCACTTTACAACACAAAAAAGTAGTGTGATGTTCTATAATT
CTAGAGAAGGGAATATATTTTGGCCCCTTCAAATAGTTAAGAGAAAAGTGTTATGGGGGGCCTCTCCAACCTCCTTTTTTCGTGAAAAAACAAAAAAAAC
AAAAAATCATATCCCTCCGAAGAAACAAAAAAAGAAAACACAATTGAATTTGGTTCC
>LE_HBa0006N06_T7_2939 (trimmed for quality and cloning vector)
AGCTTAAATCTATTGTTGTCGATAGCCCTTTCTACTTTTCATTTCCTTTATATGGTGTTAATGCTTCACACTCTGATTTAACATTTCAAATCACTAATGC
GACTATATTTTAATTTCCATATAAAATTCATTAGGGCGGATGTAGTTAACAAGCAACAGGTTCATCCGAATCCATCCAATGATTTTAATAGATTTTATAT
ATATATATATATATATATATATATATATATATATATATATATATATATATATAAATATATATATATATACACATATATATATATATATATATATATATAT
ATATATAT

This is probably not a useful sequence.

Problems:
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.776227
Expected error %
0.54171
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006N06
Clone
Clone name
hba-6n6
LE_HBa0006N06
P006N06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found