Clone Read LE_HBa0006N14_SP6_2954

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0006N14_SP6_2954
Primer
SP6
ID from Seq. Facility
LE_HBa_006_N14-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
849 trimmed for vector and quality, 972 raw
Genbank Accession
Sequence
>LE_HBa0006N14_SP6_2954 (raw untrimmed)
AATAAAAAAAGGTTTTTCTTTCCTCTGTGTACGGATTTGTTGCTTCATATATCAGTAGCAGTCTACAAGTTGGGTAATGAACTTGACAGCCCTTTTAGAT
CTTGGATATATGAGTGCCATATCAGAAATGTCACCTTAGTTTGGATGAACAAAGCATATAGTGAATGTCTTCTTCAGCTTAAAGAAAAAAAACATCGTGC
AATCAATTCGATTTGGATTTCAGATATCGTTCAATATTTTTACAAAGGCTTTACAGCACAAACAGCCATAATGAAAGTCAAGCAACTGAGCCTGAGAATG
CATATCCATATTTCAAAGTATAATGCACTGTAGGCTCAACATCTGAGCATGCAGTCAAACTTAATAGTGACAACCAGTCGCATTCTACATATGTAGGATT
AAAGAAGTAGATTTTTTGACCTATGGCACCCAAAGCACAAAGCACAAAGGTATCAATGAAGTGAGTAAAAACCTTGAATACCATTGATCAAATTTTAGCA
GACAAAAGATACAAGGTGATTTCTTCCGACCTGCTTAACCTTGTCAACGGGGTTACTCAGTACTTGTGAGAGGTAGCATATATCCAGTAGAATAGCTGAA
AGTGTGTGTTTACGTAATTGAGTTTCTGACATACAACAATCTTGTTGAACTCACAGAACTTTTAACTATTACCCATCTATGTGTGCTGCAAAGATTTAAA
AAGTCAACAAATAGAAACTCGGCCATAGAAAGAGGATCTCATTAAGTTAAGAACAAATACATGTTTTTCCACATCATAGAGCCGATTCATGACTACAATT
ATCCCATCAGTATTCATGATAGCTACTTGTCACAAAAGTTCAGAACACAGAGAGAAAAGGCAGGGCATCATTCCATGGAGCAACAATGGGCAGTCATATT
GTAATAACATCAAGAAGAAAAAATATGCACTAAACACGAAATACAAATTTGACAGTACTTAATTTCACGATG
>LE_HBa0006N14_SP6_2954 (trimmed for quality and cloning vector)
CATATATCAGTAGCAGTCTACAAGTTGGGTAATGAACTTGACAGCCCTTTTAGATCTTGGATATATGAGTGCCATATCAGAAATGTCACCTTAGTTTGGA
TGAACAAAGCATATAGTGAATGTCTTCTTCAGCTTAAAGAAAAAAAACATCGTGCAATCAATTCGATTTGGATTTCAGATATCGTTCAATATTTTTACAA
AGGCTTTACAGCACAAACAGCCATAATGAAAGTCAAGCAACTGAGCCTGAGAATGCATATCCATATTTCAAAGTATAATGCACTGTAGGCTCAACATCTG
AGCATGCAGTCAAACTTAATAGTGACAACCAGTCGCATTCTACATATGTAGGATTAAAGAAGTAGATTTTTTGACCTATGGCACCCAAAGCACAAAGCAC
AAAGGTATCAATGAAGTGAGTAAAAACCTTGAATACCATTGATCAAATTTTAGCAGACAAAAGATACAAGGTGATTTCTTCCGACCTGCTTAACCTTGTC
AACGGGGTTACTCAGTACTTGTGAGAGGTAGCATATATCCAGTAGAATAGCTGAAAGTGTGTGTTTACGTAATTGAGTTTCTGACATACAACAATCTTGT
TGAACTCACAGAACTTTTAACTATTACCCATCTATGTGTGCTGCAAAGATTTAAAAAGTCAACAAATAGAAACTCGGCCATAGAAAGAGGATCTCATTAA
GTTAAGAACAAATACATGTTTTTCCACATCATAGAGCCGATTCATGACTACAATTATCCCATCAGTATTCATGATAGCTACTTGTCACAAAAGTTCAGAA
CACAGAGAGAAAAGGCAGGGCATCATTCCATGGAGCAACAATGGGCAGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.956108
Expected error %
0.457609
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0006N14
Clone
Clone name
hba-6n14
LE_HBa0006N14
P006N14
Clone type
BAC
Contamination
none
Estimated length
131,885
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found