Clone Read LE_HBa0097D09_T7_29729

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0097D09_T7_29729
Primer
T7
ID from Seq. Facility
LE_HBa_097_D09-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
594 trimmed for vector and quality, 859 raw
Genbank Accession
DU040727
Sequence
>LE_HBa0097D09_T7_29729 (raw untrimmed)
CTCGGGGCCGGGGGGTCCTCTAGAGTCGGACCTGCAGGCATGCAAGCTTCACAACCTCATCTTTCCAACCCATTACAATTACATAATCACATCATGCAAG
CATACAATTAAGCATATGTAAGACTTTACAATACTACCCAATACATATCATTCGCTATTAAGAGTTTACTATGAAATAGCATAAACCATAACCTACCTCC
ACCGAAGAATTCGTGATCACGCAAGCTACTCCTCAAGGTCTTTGCTTTCCTCTTCATTCTCTCTTCTCTCGCTCGTTCGTCCCTCTCTTTTGTTCTTTCT
ATTTTTCCTTATTCAAACTCTTTTTCTTTTACCCTAATTACCATATAATTAAGTATAAAAGATGGTAAAAGTAACCCACTATTTATTTCAAGGTTATCAC
CTTTAACCCCCAAGTAATTGAATTATTAACATTAACCCACTAACTTTATAATTATAAGCAGAAATAGTCCAAAACGCCCCTTAAAACATTTAACAGAAAT
CTGACCCAGTCAAGGTTACGCAGCCTGTGACGGCCCGTCGTGCCTATGACGGTCCGTCCTGCTGCTTCCGTCACAAAGTTCAGAGACTGAATTTCATTAA
AGGGTCTGTGACGGTCCGTCGTGCCCATCTACTGTCCGTCCTGTCATGTCGTCGCGAAGTTCATAGAGTTGTTCTCATTACCCAAAATTTTAAGAATCTA
AATTGTTTGGGAAGAAATCCCCCTCGACGGTCCGTCTTGCCTTCTAGGGGTCTCGCCGTGGCCTGCTGAGGGTGCTGGATCATGTGTTCCCCTAATTCTG
TTTAGACGGATAATATCATATTTGTAGAGGAGATATTGTTGCGGCCCTTCTCCCCTGCT
>LE_HBa0097D09_T7_29729 (trimmed for quality and cloning vector)
AGCTTCACAACCTCATCTTTCCAACCCATTACAATTACATAATCACATCATGCAAGCATACAATTAAGCATATGTAAGACTTTACAATACTACCCAATAC
ATATCATTCGCTATTAAGAGTTTACTATGAAATAGCATAAACCATAACCTACCTCCACCGAAGAATTCGTGATCACGCAAGCTACTCCTCAAGGTCTTTG
CTTTCCTCTTCATTCTCTCTTCTCTCGCTCGTTCGTCCCTCTCTTTTGTTCTTTCTATTTTTCCTTATTCAAACTCTTTTTCTTTTACCCTAATTACCAT
ATAATTAAGTATAAAAGATGGTAAAAGTAACCCACTATTTATTTCAAGGTTATCACCTTTAACCCCCAAGTAATTGAATTATTAACATTAACCCACTAAC
TTTATAATTATAAGCAGAAATAGTCCAAAACGCCCCTTAAAACATTTAACAGAAATCTGACCCAGTCAAGGTTACGCAGCCTGTGACGGCCCGTCGTGCC
TATGACGGTCCGTCCTGCTGCTTCCGTCACAAAGTTCAGAGACTGAATTTCATTAAAGGGTCTGTGACGGTCCGTCGTGCCCATCTACTGTCCG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.962043
Expected error %
0.355344
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0097D09
Clone
Clone name
hba-97d9
LE_HBa0097D09
C08HBa0097D09
P097D09
Clone type
BAC
Contamination
none
Estimated length
130,311
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found