Clone Read LE_HBa0098L02_T7_30867

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0098L02_T7_30867
Primer
T7
ID from Seq. Facility
LE_HBa_098_L02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1334 raw
Sequence
>LE_HBa0098L02_T7_30867 (raw untrimmed)
TGTGAGAATGAGCATCTAGAGTGCTGAACATCTTGCNTAACACTACTCGTTTACAGACAANTGACAGTAGCGAGCGCTCGCCATTATATGCACGAGTGCT
GTTCATGCTGTNNTATCTNTGCCNNTCAAGACNGACTCCGCCCGCTNCACNCCTCAGACGCACCNACCAGTGATCGACGTGCGATAGACTTGATGGAGTG
ACTGTGTTACTCGACAATTGTGGTGTACCTCTCCATCAATACCTCTCGTTGTTCGTGCGCTGCTNGTGCTNACGTTCTNCAACTCTCCCGCGCGGACACC
TGCTCTATNTGCTGCCTTCANATACGCTGTGGCTCGTCCGCCACAANCTCACGCATTAGTGTCGCTGGCGGCTCGTAGACTCCTATAGACTCGTCNCACG
NCGTTCNTNGCATGCAGATAACACAGTAGCGACNACGCTACTGANCATCATATAATACGCATACCGANGCAAANANGTGCANGGATGACTGATGTGTGNC
ATTGGAGTGCTTNGGCTCGTGGGTGTCTNNTGTTANGACTGTTGGANCGCTGCTNTCGTATGTGNTCGACTTNTGCTACTTGCTCTCACGTAGAGCTGGT
GACTGCTCATACTCCACACCTGCAGCATNAGTGTATAGAAATCGATCGTTGTATNCNTNTNACAGATCGATGATCGAATGAAGATACTGTATNATATGTA
AGACATAACTCCTATCTGTATNAGTGTATCGNATATGCCACTCGTGCTGCTTATCTTCAGACCTCATCTGCGATTTCTGTCACATCTTCATCGCCTGATC
TCATCACTGTCGATAGCGTGTCTGATGCGCGTGCTTGNCTCTGCTGCGTCCTACCGCGCACGAGCCGCTGGNTCGCTCGCCATCTCTGATCGTCTGCTCC
GCTGNANGGCGGCGCTCGCTATACTNTGCCTCTGCGTATTGCTCGACTCCATTATCTCACNACTGCATTACACTGGTCCTCCGCAGCGTGCGACGNCCGC
GTGGGTAACCTACTGTGACGCATACGGGACATAGGGCATGGTGAACAGNGATACTNACANGTCCTGCGACGAGGTATATGTANTGTGATGATATGTTGTC
TGTGCGATGCTATACACACAATCACTTCATAANTNACNCTATGNTCTANCACNATATCATCTCTACGCTCATACACTGACTCATGCACGACTACGTACAN
CNANCGATAATAGTCGCGCTNCCCCTGTGACGTCTATCCACGAGCANACTCGGTAGTANGTATATGTCGTAGTAAATGTGTCTTGATCGTNCTACTGCCA
CTACGACTCTGCTTCNGTATCGATACACATATGN
>LE_HBa0098L02_T7_30867 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.02663
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0098L02
Clone
Clone name
hba-98l2
LE_HBa0098L02
C06HBa0098L02
P098L02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found