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Clone Read LE_HBa0099D01_SP6_31248

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0099D01_SP6_31248
Primer
SP6
ID from Seq. Facility
LE_HBa_099_D01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
259 trimmed for vector and quality, 742 raw
Sequence
>LE_HBa0099D01_SP6_31248 (raw untrimmed)
CAAAGGTAAATTTTATATGTTCAAGGAATTCCTTATTATTGCAAAATCCCTTTTGAGCGTAGAATCGTTCGCGAACATTTATCGAGATTTATTATTTTAT
CACTCTATTAGCTTGACATTATGAGTGATCTCATGTAATTGTGTACGTACATATTTGTATTAATATATATTAAATATAGAAGACTTGGACTTGGATCGAA
ACTTAAAATAAATATTTCATTTATAGATATGATTTTTGTTACAGACAAGAGTAACATATATAAAAATAAGGGTCATATCATACATATATATTTGTAATGC
AATACAAACTATACAAAATACGTCAAAAATAAAAGATACCAAAACAGAATATGGCGATAATGACAGTGTATGTATACTCAATAATAATATTTGTGTGATC
CCTCCTCGAGAAATACCGTCACAATATAGTAGGCATGGCGGCCAAACAGTATCCATCCGTGCTTACACAAGACTTACTCGTGATCGTCTCTGAAAATGTC
CGTAGTAATAATCTGTCTCTCCACTCATTCTTTATCTCTTCTAATCACTTAATCACGTCTCATTCGTAAATAACTGCCTCCTCACCAGATACTTTTGTCG
TTCATCTTTAGTTCTATACGCTACTCTGCCAATATATTCGTTCTGTCGTATTCATTACTGTTTCTGATATTGCTTTATCTATGAATACTATTATTCTGAC
TACGTATTTATTACTCTTATAGACAATTAATGGCATGGTAAT
>LE_HBa0099D01_SP6_31248 (trimmed for quality and cloning vector)
GAACATTTATCGAGATTTATTATTTTATCACTCTATTAGCTTGACATTATGAGTGATCTCATGTAATTGTGTACGTACATATTTGTATTAATATATATTA
AATATAGAAGACTTGGACTTGGATCGAAACTTAAAATAAATATTTCATTTATAGATATGATTTTTGTTACAGACAAGAGTAACATATATAAAAATAAGGG
TCATATCATACATATATATTTGTAATGCAATACAAACTATACAAAATACGTCAAAAATA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.870791
Expected error %
0.313155
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0099D01
Clone
Clone name
hba-99d1
LE_HBa0099D01
P099D01
Clone type
BAC
Contamination
none
Estimated length
173,766
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found